Hb_000098_240

Information

Type -
Description -
Location Contig98: 232183-259263
Sequence    

Annotation

kegg
ID rcu:RCOM_0406990
description UDP-glucose glycoprotein:glucosyltransferase, putative
nr
ID XP_012071315.1
description PREDICTED: UDP-glucose:glycoprotein glucosyltransferase [Jatropha curcas]
swissprot
ID Q0WL80
description UDP-glucose:glycoprotein glucosyltransferase OS=Arabidopsis thaliana GN=UGGT PE=1 SV=1
trembl
ID A0A067KV48
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05000 PE=4 SV=1
Gene Ontology
ID GO:0003980
description udp-glucose:glycoprotein glucosyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64369: 234021-234298 , PASA_asmbl_64371: 232473-235423 , PASA_asmbl_64372: 234320-234430 , PASA_asmbl_64373: 242554-244925 , PASA_asmbl_64375: 256087-294348
cDNA
(Sanger)
(ID:Location)		 025_I04.ab1: 256124-294228 , 032_F13.ab1: 256203-294228

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000098_240 0.0 - - PREDICTED: UDP-glucose:glycoprotein glucosyltransferase [Jatropha curcas]
2 Hb_033642_040 0.0721290497 - - PREDICTED: 5'-nucleotidase domain-containing protein 4 isoform X1 [Jatropha curcas]
3 Hb_016448_010 0.0772466693 - - Protein MYG1, putative [Ricinus communis]
4 Hb_000878_160 0.0850954442 - - PREDICTED: D-lactate dehydrogenase [cytochrome], mitochondrial [Jatropha curcas]
5 Hb_001158_160 0.0861413676 - - PREDICTED: RNA pseudouridine synthase 7 isoform X1 [Jatropha curcas]
6 Hb_026234_010 0.0895188952 - - choline monooxygenase, putative [Ricinus communis]
7 Hb_000820_150 0.0920348617 - - PREDICTED: ACT domain-containing protein ACR9-like [Jatropha curcas]
8 Hb_002870_020 0.092251425 - - PREDICTED: uncharacterized GPI-anchored protein At1g61900 isoform X1 [Jatropha curcas]
9 Hb_004032_370 0.0929822445 - - pyrophosphate-dependent phosphofructokinase [Hevea brasiliensis]
10 Hb_001623_490 0.0970634824 - - PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 isoform X2 [Jatropha curcas]
11 Hb_005873_020 0.0981819588 - - PREDICTED: ATP-dependent zinc metalloprotease FtsH [Jatropha curcas]
12 Hb_002871_140 0.0983078131 - - hypothetical protein JCGZ_06847 [Jatropha curcas]
13 Hb_000826_030 0.098348252 - - PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Jatropha curcas]
14 Hb_003228_100 0.1004056082 - - PREDICTED: kinesin-related protein 4 [Jatropha curcas]
15 Hb_008387_010 0.1016061658 - - SMAD/FHA domain-containing protein isoform 3 [Theobroma cacao]
16 Hb_001396_020 0.1027777681 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
17 Hb_000724_020 0.1045701953 transcription factor TF Family: PHD PREDICTED: probable Histone-lysine N-methyltransferase ATXR5 [Jatropha curcas]
18 Hb_004096_060 0.1045734247 - - PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2 [Jatropha curcas]
19 Hb_001427_210 0.104977101 - - PREDICTED: uncharacterized protein LOC105637797 isoform X1 [Jatropha curcas]
20 Hb_004116_160 0.1051254718 - - PREDICTED: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000098_240 Hb_000098_240 Hb_033642_040 Hb_033642_040 Hb_000098_240--Hb_033642_040 Hb_016448_010 Hb_016448_010 Hb_000098_240--Hb_016448_010 Hb_000878_160 Hb_000878_160 Hb_000098_240--Hb_000878_160 Hb_001158_160 Hb_001158_160 Hb_000098_240--Hb_001158_160 Hb_026234_010 Hb_026234_010 Hb_000098_240--Hb_026234_010 Hb_000820_150 Hb_000820_150 Hb_000098_240--Hb_000820_150 Hb_004096_060 Hb_004096_060 Hb_033642_040--Hb_004096_060 Hb_000175_410 Hb_000175_410 Hb_033642_040--Hb_000175_410 Hb_033642_040--Hb_000820_150 Hb_016777_040 Hb_016777_040 Hb_033642_040--Hb_016777_040 Hb_008397_010 Hb_008397_010 Hb_033642_040--Hb_008397_010 Hb_003506_030 Hb_003506_030 Hb_016448_010--Hb_003506_030 Hb_021596_020 Hb_021596_020 Hb_016448_010--Hb_021596_020 Hb_012438_030 Hb_012438_030 Hb_016448_010--Hb_012438_030 Hb_001504_010 Hb_001504_010 Hb_016448_010--Hb_001504_010 Hb_016448_010--Hb_026234_010 Hb_002461_020 Hb_002461_020 Hb_000878_160--Hb_002461_020 Hb_002600_070 Hb_002600_070 Hb_000878_160--Hb_002600_070 Hb_009178_010 Hb_009178_010 Hb_000878_160--Hb_009178_010 Hb_007283_010 Hb_007283_010 Hb_000878_160--Hb_007283_010 Hb_004324_330 Hb_004324_330 Hb_000878_160--Hb_004324_330 Hb_005333_140 Hb_005333_140 Hb_000878_160--Hb_005333_140 Hb_030414_040 Hb_030414_040 Hb_001158_160--Hb_030414_040 Hb_000826_030 Hb_000826_030 Hb_001158_160--Hb_000826_030 Hb_021943_080 Hb_021943_080 Hb_001158_160--Hb_021943_080 Hb_031284_010 Hb_031284_010 Hb_001158_160--Hb_031284_010 Hb_000120_210 Hb_000120_210 Hb_001158_160--Hb_000120_210 Hb_004096_240 Hb_004096_240 Hb_001158_160--Hb_004096_240 Hb_008387_010 Hb_008387_010 Hb_026234_010--Hb_008387_010 Hb_001519_040 Hb_001519_040 Hb_026234_010--Hb_001519_040 Hb_026234_010--Hb_003506_030 Hb_007413_040 Hb_007413_040 Hb_026234_010--Hb_007413_040 Hb_001194_020 Hb_001194_020 Hb_000820_150--Hb_001194_020 Hb_098209_010 Hb_098209_010 Hb_000820_150--Hb_098209_010 Hb_005895_010 Hb_005895_010 Hb_000820_150--Hb_005895_010 Hb_003398_100 Hb_003398_100 Hb_000820_150--Hb_003398_100 Hb_000640_070 Hb_000640_070 Hb_000820_150--Hb_000640_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.83141 11.5018 29.2584 14.1151 10.2915 13.4286
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.92386 4.62717 4.12308 12.093 17.4552

CAGE analysis