Hb_007413_040

Information

Type -
Description -
Location Contig7413: 38882-43527
Sequence    

Annotation

kegg
ID rcu:RCOM_1448790
description myo inositol monophosphatase, putative (EC:3.1.3.25)
nr
ID XP_002512951.1
description myo inositol monophosphatase, putative [Ricinus communis]
swissprot
ID Q6NPM8
description Bifunctional phosphatase IMPL2, chloroplastic OS=Arabidopsis thaliana GN=HISN7 PE=1 SV=1
trembl
ID B9RH92
description Myo inositol monophosphatase, putative OS=Ricinus communis GN=RCOM_1448790 PE=4 SV=1
Gene Ontology
ID GO:0004401
description bifunctional phosphatase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56392: 38886-42178
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007413_040 0.0 - - myo inositol monophosphatase, putative [Ricinus communis]
2 Hb_000019_190 0.0722659597 - - hypothetical protein POPTR_0002s23900g [Populus trichocarpa]
3 Hb_023313_040 0.0759679757 - - PREDICTED: uncharacterized protein LOC105640827 isoform X2 [Jatropha curcas]
4 Hb_004096_160 0.0764756359 - - PREDICTED: T-complex protein 1 subunit zeta 1 [Jatropha curcas]
5 Hb_005730_010 0.0768919157 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 7 isoform X1 [Populus euphratica]
6 Hb_000236_490 0.0770914492 - - 20 kD nuclear cap binding protein, putative [Ricinus communis]
7 Hb_001931_030 0.0771839929 - - PREDICTED: T-complex protein 1 subunit eta-like [Nelumbo nucifera]
8 Hb_007062_040 0.0782054625 - - ADP-ribosylation factor GTPase-activating protein AGD2 [Morus notabilis]
9 Hb_016777_040 0.0782490435 - - PREDICTED: DNA polymerase eta-like [Jatropha curcas]
10 Hb_000702_090 0.0808785676 - - 26S proteasome non-ATPase regulatory subunit 11 [Theobroma cacao]
11 Hb_004586_060 0.0820924481 - - PREDICTED: AP-4 complex subunit mu [Jatropha curcas]
12 Hb_033642_040 0.0834037616 - - PREDICTED: 5'-nucleotidase domain-containing protein 4 isoform X1 [Jatropha curcas]
13 Hb_001856_180 0.0836252595 - - PREDICTED: eukaryotic translation initiation factor 3 subunit M [Jatropha curcas]
14 Hb_002909_040 0.0839406229 desease resistance Gene Name: AAA PREDICTED: 26S protease regulatory subunit 6B homolog [Jatropha curcas]
15 Hb_000803_270 0.0845208176 - - PREDICTED: nuclear cap-binding protein subunit 1 [Jatropha curcas]
16 Hb_006501_010 0.0856349392 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A isoform X1 [Populus euphratica]
17 Hb_002615_120 0.0857343198 - - PREDICTED: rho GTPase-activating protein 7 isoform X1 [Jatropha curcas]
18 Hb_000737_030 0.0860050909 - - PREDICTED: probable galacturonosyltransferase 3 isoform X1 [Jatropha curcas]
19 Hb_007007_040 0.0866880026 desease resistance Gene Name: ArsA_ATPase arsenical pump-driving atpase, putative [Ricinus communis]
20 Hb_001002_060 0.0867263171 - - PREDICTED: putative GPI-anchor transamidase [Jatropha curcas]

Gene co-expression network

sample Hb_007413_040 Hb_007413_040 Hb_000019_190 Hb_000019_190 Hb_007413_040--Hb_000019_190 Hb_023313_040 Hb_023313_040 Hb_007413_040--Hb_023313_040 Hb_004096_160 Hb_004096_160 Hb_007413_040--Hb_004096_160 Hb_005730_010 Hb_005730_010 Hb_007413_040--Hb_005730_010 Hb_000236_490 Hb_000236_490 Hb_007413_040--Hb_000236_490 Hb_001931_030 Hb_001931_030 Hb_007413_040--Hb_001931_030 Hb_000019_190--Hb_023313_040 Hb_002014_010 Hb_002014_010 Hb_000019_190--Hb_002014_010 Hb_001227_120 Hb_001227_120 Hb_000019_190--Hb_001227_120 Hb_007007_040 Hb_007007_040 Hb_000019_190--Hb_007007_040 Hb_007248_030 Hb_007248_030 Hb_000019_190--Hb_007248_030 Hb_163175_010 Hb_163175_010 Hb_000019_190--Hb_163175_010 Hb_000702_090 Hb_000702_090 Hb_023313_040--Hb_000702_090 Hb_001002_060 Hb_001002_060 Hb_023313_040--Hb_001002_060 Hb_025668_010 Hb_025668_010 Hb_023313_040--Hb_025668_010 Hb_000803_270 Hb_000803_270 Hb_023313_040--Hb_000803_270 Hb_000006_010 Hb_000006_010 Hb_023313_040--Hb_000006_010 Hb_000958_080 Hb_000958_080 Hb_004096_160--Hb_000958_080 Hb_002909_040 Hb_002909_040 Hb_004096_160--Hb_002909_040 Hb_009449_060 Hb_009449_060 Hb_004096_160--Hb_009449_060 Hb_000089_210 Hb_000089_210 Hb_004096_160--Hb_000089_210 Hb_161568_010 Hb_161568_010 Hb_004096_160--Hb_161568_010 Hb_004096_160--Hb_000236_490 Hb_005730_010--Hb_023313_040 Hb_005730_010--Hb_025668_010 Hb_005730_010--Hb_000958_080 Hb_005730_010--Hb_004096_160 Hb_005730_010--Hb_000702_090 Hb_004586_060 Hb_004586_060 Hb_000236_490--Hb_004586_060 Hb_007062_040 Hb_007062_040 Hb_000236_490--Hb_007062_040 Hb_000513_090 Hb_000513_090 Hb_000236_490--Hb_000513_090 Hb_000236_490--Hb_002909_040 Hb_001366_090 Hb_001366_090 Hb_000236_490--Hb_001366_090 Hb_002942_210 Hb_002942_210 Hb_001931_030--Hb_002942_210 Hb_001931_030--Hb_005730_010 Hb_001931_030--Hb_025668_010 Hb_001931_030--Hb_000803_270 Hb_000847_080 Hb_000847_080 Hb_001931_030--Hb_000847_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.74184 6.6107 12.2993 8.5821 6.6001 7.22871
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.89112 4.53548 2.45309 7.5664 5.3791

CAGE analysis