Hb_001002_060

Information

Type -
Description -
Location Contig1002: 96535-101715
Sequence    

Annotation

kegg
ID pop:POPTR_0019s02260g
description GPI-anchor transamidase family protein
nr
ID XP_012089301.1
description PREDICTED: putative GPI-anchor transamidase [Jatropha curcas]
swissprot
ID P49018
description GPI-anchor transamidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GPI8 PE=1 SV=1
trembl
ID A0A067JW01
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23527 PE=4 SV=1
Gene Ontology
ID GO:0042765
description gpi-anchor transamidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00246: 96567-101718
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001002_060 0.0 - - PREDICTED: putative GPI-anchor transamidase [Jatropha curcas]
2 Hb_023313_040 0.0584820156 - - PREDICTED: uncharacterized protein LOC105640827 isoform X2 [Jatropha curcas]
3 Hb_000362_170 0.0592756471 - - PREDICTED: uncharacterized protein LOC105635728 [Jatropha curcas]
4 Hb_000737_030 0.0623079125 - - PREDICTED: probable galacturonosyltransferase 3 isoform X1 [Jatropha curcas]
5 Hb_025668_010 0.0640803849 - - unnamed protein product [Coffea canephora]
6 Hb_000261_210 0.0663746619 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
7 Hb_005895_010 0.0669410728 - - PREDICTED: uncharacterized protein LOC105643387 isoform X1 [Jatropha curcas]
8 Hb_002326_040 0.0704266039 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os01g0723500-like [Jatropha curcas]
9 Hb_007800_020 0.0719601482 - - PREDICTED: probable arabinosyltransferase ARAD1 isoform X1 [Jatropha curcas]
10 Hb_005064_010 0.0728726717 - - PREDICTED: kelch repeat-containing protein At3g27220-like [Jatropha curcas]
11 Hb_001856_180 0.076082046 - - PREDICTED: eukaryotic translation initiation factor 3 subunit M [Jatropha curcas]
12 Hb_000163_090 0.0767560867 - - gamma-tubulin complex component, putative [Ricinus communis]
13 Hb_000373_080 0.0768053902 - - PREDICTED: serine decarboxylase [Jatropha curcas]
14 Hb_007007_040 0.0782676615 desease resistance Gene Name: ArsA_ATPase arsenical pump-driving atpase, putative [Ricinus communis]
15 Hb_004096_060 0.0787460436 - - PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2 [Jatropha curcas]
16 Hb_000787_060 0.079069091 - - thioredoxin domain-containing protein, putative [Ricinus communis]
17 Hb_000702_090 0.0800506354 - - 26S proteasome non-ATPase regulatory subunit 11 [Theobroma cacao]
18 Hb_002811_270 0.0803897383 - - PREDICTED: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase [Jatropha curcas]
19 Hb_000635_040 0.080587419 - - PREDICTED: nuclear pore complex protein NUP54 [Jatropha curcas]
20 Hb_000640_070 0.0812773316 - - PREDICTED: vacuolar protein sorting-associated protein 51 homolog [Jatropha curcas]

Gene co-expression network

sample Hb_001002_060 Hb_001002_060 Hb_023313_040 Hb_023313_040 Hb_001002_060--Hb_023313_040 Hb_000362_170 Hb_000362_170 Hb_001002_060--Hb_000362_170 Hb_000737_030 Hb_000737_030 Hb_001002_060--Hb_000737_030 Hb_025668_010 Hb_025668_010 Hb_001002_060--Hb_025668_010 Hb_000261_210 Hb_000261_210 Hb_001002_060--Hb_000261_210 Hb_005895_010 Hb_005895_010 Hb_001002_060--Hb_005895_010 Hb_000019_190 Hb_000019_190 Hb_023313_040--Hb_000019_190 Hb_000702_090 Hb_000702_090 Hb_023313_040--Hb_000702_090 Hb_023313_040--Hb_025668_010 Hb_000803_270 Hb_000803_270 Hb_023313_040--Hb_000803_270 Hb_000006_010 Hb_000006_010 Hb_023313_040--Hb_000006_010 Hb_000362_170--Hb_005895_010 Hb_002014_040 Hb_002014_040 Hb_000362_170--Hb_002014_040 Hb_001005_030 Hb_001005_030 Hb_000362_170--Hb_001005_030 Hb_000214_050 Hb_000214_050 Hb_000362_170--Hb_000214_050 Hb_000373_080 Hb_000373_080 Hb_000362_170--Hb_000373_080 Hb_032990_010 Hb_032990_010 Hb_000737_030--Hb_032990_010 Hb_000737_030--Hb_001005_030 Hb_004586_060 Hb_004586_060 Hb_000737_030--Hb_004586_060 Hb_000737_030--Hb_000373_080 Hb_001377_310 Hb_001377_310 Hb_000737_030--Hb_001377_310 Hb_004096_060 Hb_004096_060 Hb_025668_010--Hb_004096_060 Hb_005730_010 Hb_005730_010 Hb_025668_010--Hb_005730_010 Hb_002942_210 Hb_002942_210 Hb_025668_010--Hb_002942_210 Hb_025668_010--Hb_000261_210 Hb_002473_050 Hb_002473_050 Hb_000261_210--Hb_002473_050 Hb_000054_040 Hb_000054_040 Hb_000261_210--Hb_000054_040 Hb_002351_030 Hb_002351_030 Hb_000261_210--Hb_002351_030 Hb_000371_090 Hb_000371_090 Hb_000261_210--Hb_000371_090 Hb_002539_110 Hb_002539_110 Hb_005895_010--Hb_002539_110 Hb_007800_020 Hb_007800_020 Hb_005895_010--Hb_007800_020 Hb_005895_010--Hb_002014_040 Hb_000640_070 Hb_000640_070 Hb_005895_010--Hb_000640_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.64763 5.97604 12.2605 12.2826 8.25062 7.22824
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.36092 4.56623 4.2193 6.55207 8.00235

CAGE analysis