Hb_000371_090

Information

Type -
Description -
Location Contig371: 186433-200976
Sequence    

Annotation

kegg
ID rcu:RCOM_0553160
description dolichyl-diphosphooligosaccharide--protein glycosyltransferase, putative (EC:2.4.1.119)
nr
ID XP_012079088.1
description PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit-like [Jatropha curcas]
swissprot
ID Q944K2
description Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Arabidopsis thaliana GN=OST48 PE=2 SV=1
trembl
ID A0A067K6T2
description Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Jatropha curcas GN=JCGZ_12268 PE=3 SV=1
Gene Ontology
ID GO:0005730
description dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kda subunit-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38042: 186509-201086 , PASA_asmbl_38043: 188237-193578 , PASA_asmbl_38044: 198822-198920
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000371_090 0.0 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit-like [Jatropha curcas]
2 Hb_003998_040 0.0731123082 - - organic anion transporter, putative [Ricinus communis]
3 Hb_000184_070 0.073671101 - - PREDICTED: uncharacterized protein LOC105641537 isoform X1 [Jatropha curcas]
4 Hb_011214_160 0.0771254679 - - PREDICTED: coatomer subunit delta [Jatropha curcas]
5 Hb_000261_210 0.0784089616 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
6 Hb_002351_030 0.0833362908 - - catalytic, putative [Ricinus communis]
7 Hb_000066_030 0.0835227495 - - PREDICTED: uncharacterized protein LOC105643898 isoform X2 [Jatropha curcas]
8 Hb_000656_160 0.0859552956 - - PREDICTED: transmembrane protein 87A [Jatropha curcas]
9 Hb_159809_030 0.0882272732 - - PREDICTED: UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 2-like isoform X2 [Jatropha curcas]
10 Hb_000139_530 0.0895292486 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000352_300 0.0904779808 - - PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Jatropha curcas]
12 Hb_000300_600 0.0922412559 - - tubulin alpha chain, putative [Ricinus communis]
13 Hb_030982_010 0.0927621564 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001051_070 0.0945695893 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
15 Hb_003777_200 0.0956659475 - - PREDICTED: uncharacterized protein LOC105640933 [Jatropha curcas]
16 Hb_002473_050 0.0973582063 - - catalytic, putative [Ricinus communis]
17 Hb_001789_030 0.0973822809 - - PREDICTED: signal peptide peptidase-like 1 [Jatropha curcas]
18 Hb_000331_370 0.0980391799 - - Glyceraldehyde-3-phosphate dehydrogenase-2C cytosolic [Gossypium arboreum]
19 Hb_000163_090 0.098739119 - - gamma-tubulin complex component, putative [Ricinus communis]
20 Hb_086639_080 0.099194258 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000371_090 Hb_000371_090 Hb_003998_040 Hb_003998_040 Hb_000371_090--Hb_003998_040 Hb_000184_070 Hb_000184_070 Hb_000371_090--Hb_000184_070 Hb_011214_160 Hb_011214_160 Hb_000371_090--Hb_011214_160 Hb_000261_210 Hb_000261_210 Hb_000371_090--Hb_000261_210 Hb_002351_030 Hb_002351_030 Hb_000371_090--Hb_002351_030 Hb_000066_030 Hb_000066_030 Hb_000371_090--Hb_000066_030 Hb_003998_040--Hb_000066_030 Hb_005218_020 Hb_005218_020 Hb_003998_040--Hb_005218_020 Hb_003998_040--Hb_011214_160 Hb_007765_040 Hb_007765_040 Hb_003998_040--Hb_007765_040 Hb_001633_080 Hb_001633_080 Hb_003998_040--Hb_001633_080 Hb_000352_300 Hb_000352_300 Hb_000184_070--Hb_000352_300 Hb_001789_030 Hb_001789_030 Hb_000184_070--Hb_001789_030 Hb_001703_050 Hb_001703_050 Hb_000184_070--Hb_001703_050 Hb_000163_090 Hb_000163_090 Hb_000184_070--Hb_000163_090 Hb_002675_030 Hb_002675_030 Hb_000184_070--Hb_002675_030 Hb_011214_160--Hb_001703_050 Hb_001051_070 Hb_001051_070 Hb_011214_160--Hb_001051_070 Hb_000197_020 Hb_000197_020 Hb_011214_160--Hb_000197_020 Hb_000139_530 Hb_000139_530 Hb_011214_160--Hb_000139_530 Hb_002473_050 Hb_002473_050 Hb_000261_210--Hb_002473_050 Hb_000054_040 Hb_000054_040 Hb_000261_210--Hb_000054_040 Hb_001002_060 Hb_001002_060 Hb_000261_210--Hb_001002_060 Hb_025668_010 Hb_025668_010 Hb_000261_210--Hb_025668_010 Hb_000261_210--Hb_002351_030 Hb_002351_030--Hb_001002_060 Hb_001227_130 Hb_001227_130 Hb_002351_030--Hb_001227_130 Hb_003119_090 Hb_003119_090 Hb_002351_030--Hb_003119_090 Hb_001252_090 Hb_001252_090 Hb_002351_030--Hb_001252_090 Hb_000066_030--Hb_005218_020 Hb_000066_030--Hb_000197_020 Hb_000066_030--Hb_007765_040 Hb_000066_030--Hb_011214_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
19.5924 12.0187 32.091 57.6669 25.0342 22.1308
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.3509 10.951 20.2849 27.0318 22.9575

CAGE analysis