Hb_007765_040

Information

Type -
Description -
Location Contig7765: 29077-37112
Sequence    

Annotation

kegg
ID rcu:RCOM_0731100
description enolase, putative (EC:4.2.1.11)
nr
ID XP_007016215.1
description Cytosolic enolase isoform 3 [Theobroma cacao]
swissprot
ID Q9ZW34
description Cytosolic enolase 3 OS=Arabidopsis thaliana GN=ENO3 PE=1 SV=1
trembl
ID A0A061GZY3
description Cytosolic enolase isoform 3 OS=Theobroma cacao GN=TCM_041694 PE=3 SV=1
Gene Ontology
ID GO:0005634
description cytosolic enolase 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57824: 29064-37365 , PASA_asmbl_57825: 29099-36908
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007765_040 0.0 - - Cytosolic enolase isoform 3 [Theobroma cacao]
2 Hb_000390_050 0.0505551898 - - PREDICTED: GPCR-type G protein 1 [Jatropha curcas]
3 Hb_003998_040 0.068308722 - - organic anion transporter, putative [Ricinus communis]
4 Hb_003097_140 0.0703136707 - - PREDICTED: glycosyltransferase-like KOBITO 1 [Jatropha curcas]
5 Hb_005218_020 0.0741770969 - - Uncharacterized protein isoform 3 [Theobroma cacao]
6 Hb_000066_030 0.0757588587 - - PREDICTED: uncharacterized protein LOC105643898 isoform X2 [Jatropha curcas]
7 Hb_007416_210 0.0850251123 - - PREDICTED: coatomer subunit beta-1 [Jatropha curcas]
8 Hb_002902_130 0.086910754 - - PREDICTED: molybdate-anion transporter [Jatropha curcas]
9 Hb_001491_030 0.0900826266 - - PREDICTED: uncharacterized protein LOC105649804 isoform X1 [Jatropha curcas]
10 Hb_002226_080 0.0914307057 - - PREDICTED: uncharacterized protein LOC105641402 isoform X1 [Jatropha curcas]
11 Hb_002928_090 0.0935833342 - - PREDICTED: metallocarboxypeptidase A-like protein TRV_02598 [Jatropha curcas]
12 Hb_001440_020 0.0954799225 - - exocyst componenet sec8, putative [Ricinus communis]
13 Hb_003994_220 0.0959104286 - - PREDICTED: V-type proton ATPase catalytic subunit A [Jatropha curcas]
14 Hb_001703_050 0.0979511334 - - Transmembrane emp24 domain-containing protein 10 precursor, putative [Ricinus communis]
15 Hb_012194_060 0.0985858523 - - PREDICTED: uncharacterized protein LOC105636108 [Jatropha curcas]
16 Hb_000014_040 0.0986271445 - - conserved hypothetical protein [Ricinus communis]
17 Hb_011214_160 0.0988740962 - - PREDICTED: coatomer subunit delta [Jatropha curcas]
18 Hb_000184_070 0.0993394252 - - PREDICTED: uncharacterized protein LOC105641537 isoform X1 [Jatropha curcas]
19 Hb_000917_130 0.1010540927 - - PREDICTED: uncharacterized protein LOC105635730 [Jatropha curcas]
20 Hb_000389_030 0.1014274298 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B [Jatropha curcas]

Gene co-expression network

sample Hb_007765_040 Hb_007765_040 Hb_000390_050 Hb_000390_050 Hb_007765_040--Hb_000390_050 Hb_003998_040 Hb_003998_040 Hb_007765_040--Hb_003998_040 Hb_003097_140 Hb_003097_140 Hb_007765_040--Hb_003097_140 Hb_005218_020 Hb_005218_020 Hb_007765_040--Hb_005218_020 Hb_000066_030 Hb_000066_030 Hb_007765_040--Hb_000066_030 Hb_007416_210 Hb_007416_210 Hb_007765_040--Hb_007416_210 Hb_000417_390 Hb_000417_390 Hb_000390_050--Hb_000417_390 Hb_000390_050--Hb_003097_140 Hb_000390_050--Hb_007416_210 Hb_002928_090 Hb_002928_090 Hb_000390_050--Hb_002928_090 Hb_002902_130 Hb_002902_130 Hb_000390_050--Hb_002902_130 Hb_003998_040--Hb_000066_030 Hb_003998_040--Hb_005218_020 Hb_011214_160 Hb_011214_160 Hb_003998_040--Hb_011214_160 Hb_001633_080 Hb_001633_080 Hb_003998_040--Hb_001633_080 Hb_000371_090 Hb_000371_090 Hb_003998_040--Hb_000371_090 Hb_003994_220 Hb_003994_220 Hb_003097_140--Hb_003994_220 Hb_001440_020 Hb_001440_020 Hb_003097_140--Hb_001440_020 Hb_000477_100 Hb_000477_100 Hb_003097_140--Hb_000477_100 Hb_027445_020 Hb_027445_020 Hb_003097_140--Hb_027445_020 Hb_005218_020--Hb_000066_030 Hb_000917_130 Hb_000917_130 Hb_005218_020--Hb_000917_130 Hb_003529_030 Hb_003529_030 Hb_005218_020--Hb_003529_030 Hb_004055_120 Hb_004055_120 Hb_005218_020--Hb_004055_120 Hb_000197_020 Hb_000197_020 Hb_000066_030--Hb_000197_020 Hb_000066_030--Hb_000371_090 Hb_000066_030--Hb_011214_160 Hb_007416_210--Hb_003097_140 Hb_007416_210--Hb_003994_220 Hb_043792_040 Hb_043792_040 Hb_007416_210--Hb_043792_040 Hb_003340_010 Hb_003340_010 Hb_007416_210--Hb_003340_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.50705 2.81153 5.44634 13.8882 4.58195 5.1809
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.61291 3.12441 5.23209 5.81707 8.16491

CAGE analysis