Hb_006573_160

Information

Type -
Description -
Location Contig6573: 101922-106367
Sequence    

Annotation

kegg
ID rcu:RCOM_1581960
description heat shock protein binding protein, putative
nr
ID XP_012090168.1
description PREDICTED: dnaJ protein ERDJ2A-like [Jatropha curcas]
swissprot
ID Q0WT48
description DnaJ protein ERDJ2A OS=Arabidopsis thaliana GN=ERDJ2A PE=1 SV=1
trembl
ID A0A067JEJ2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26043 PE=4 SV=1
Gene Ontology
ID GO:0005622
description dnaj protein erdj2a-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52817: 101754-107134 , PASA_asmbl_52818: 101754-107132
cDNA
(Sanger)
(ID:Location)		 001_I20.ab1: 105104-107145 , 043_E19.ab1: 105213-107132

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006573_160 0.0 - - PREDICTED: dnaJ protein ERDJ2A-like [Jatropha curcas]
2 Hb_001153_050 0.0654012844 - - PREDICTED: protein FIZZY-RELATED 2 [Jatropha curcas]
3 Hb_011972_020 0.0788013448 - - protein binding protein, putative [Ricinus communis]
4 Hb_002814_110 0.079350759 - - PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Jatropha curcas]
5 Hb_098209_010 0.080260774 - - ATP synthase subunit beta vacuolar, putative [Ricinus communis]
6 Hb_000302_170 0.0807797694 - - PREDICTED: dnaJ protein ERDJ2A-like [Jatropha curcas]
7 Hb_000102_050 0.0810657316 transcription factor TF Family: RB conserved hypothetical protein [Ricinus communis]
8 Hb_010287_030 0.0851066545 - - conserved hypothetical protein [Ricinus communis]
9 Hb_005323_010 0.0857890671 - - PREDICTED: uncharacterized protein LOC105642810 [Jatropha curcas]
10 Hb_000529_060 0.088013791 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 17 isoform X1 [Jatropha curcas]
11 Hb_001405_190 0.0894961139 - - PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial [Jatropha curcas]
12 Hb_008387_010 0.0916995745 - - SMAD/FHA domain-containing protein isoform 3 [Theobroma cacao]
13 Hb_005333_140 0.0917503868 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform X1 [Jatropha curcas]
14 Hb_000300_550 0.0921852758 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
15 Hb_000457_230 0.0924910908 - - PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic [Jatropha curcas]
16 Hb_172257_010 0.0929091658 transcription factor TF Family: HMG high mobility group family protein [Populus trichocarpa]
17 Hb_006022_010 0.0930288038 - - PREDICTED: uncharacterized protein LOC105628883 [Jatropha curcas]
18 Hb_000878_160 0.0954750291 - - PREDICTED: D-lactate dehydrogenase [cytochrome], mitochondrial [Jatropha curcas]
19 Hb_000264_070 0.0960112073 - - PREDICTED: uncharacterized protein LOC105649513 [Jatropha curcas]
20 Hb_008165_030 0.096848398 - - PREDICTED: uncharacterized protein LOC105641288 [Jatropha curcas]

Gene co-expression network

sample Hb_006573_160 Hb_006573_160 Hb_001153_050 Hb_001153_050 Hb_006573_160--Hb_001153_050 Hb_011972_020 Hb_011972_020 Hb_006573_160--Hb_011972_020 Hb_002814_110 Hb_002814_110 Hb_006573_160--Hb_002814_110 Hb_098209_010 Hb_098209_010 Hb_006573_160--Hb_098209_010 Hb_000302_170 Hb_000302_170 Hb_006573_160--Hb_000302_170 Hb_000102_050 Hb_000102_050 Hb_006573_160--Hb_000102_050 Hb_073973_150 Hb_073973_150 Hb_001153_050--Hb_073973_150 Hb_001153_050--Hb_002814_110 Hb_001153_050--Hb_011972_020 Hb_005323_010 Hb_005323_010 Hb_001153_050--Hb_005323_010 Hb_005895_010 Hb_005895_010 Hb_001153_050--Hb_005895_010 Hb_055235_020 Hb_055235_020 Hb_011972_020--Hb_055235_020 Hb_000457_230 Hb_000457_230 Hb_011972_020--Hb_000457_230 Hb_000529_060 Hb_000529_060 Hb_011972_020--Hb_000529_060 Hb_002014_040 Hb_002014_040 Hb_011972_020--Hb_002014_040 Hb_000238_040 Hb_000238_040 Hb_011972_020--Hb_000238_040 Hb_011972_020--Hb_098209_010 Hb_002814_110--Hb_011972_020 Hb_000130_420 Hb_000130_420 Hb_002814_110--Hb_000130_420 Hb_002814_110--Hb_055235_020 Hb_007800_020 Hb_007800_020 Hb_002814_110--Hb_007800_020 Hb_098209_010--Hb_000457_230 Hb_001377_110 Hb_001377_110 Hb_098209_010--Hb_001377_110 Hb_001723_140 Hb_001723_140 Hb_098209_010--Hb_001723_140 Hb_098209_010--Hb_005895_010 Hb_098209_010--Hb_002014_040 Hb_005322_050 Hb_005322_050 Hb_000302_170--Hb_005322_050 Hb_000300_550 Hb_000300_550 Hb_000302_170--Hb_000300_550 Hb_010287_030 Hb_010287_030 Hb_000302_170--Hb_010287_030 Hb_102438_030 Hb_102438_030 Hb_000302_170--Hb_102438_030 Hb_000302_170--Hb_000102_050 Hb_152910_010 Hb_152910_010 Hb_000302_170--Hb_152910_010 Hb_000102_050--Hb_102438_030 Hb_004032_230 Hb_004032_230 Hb_000102_050--Hb_004032_230 Hb_000340_030 Hb_000340_030 Hb_000102_050--Hb_000340_030 Hb_000102_050--Hb_000529_060 Hb_005333_140 Hb_005333_140 Hb_000102_050--Hb_005333_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
22.8256 30.5611 38.2556 22.8087 25.6504 18.7557
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.18324 8.2155 5.77784 16.178 24.7294

CAGE analysis