Hb_001623_110

Information

Type -
Description -
Location Contig1623: 61957-65592
Sequence    

Annotation

kegg
ID rcu:RCOM_1023280
description transferase, transferring glycosyl groups, putative (EC:2.4.2.26)
nr
ID XP_012092665.1
description PREDICTED: xylosyltransferase 1 [Jatropha curcas]
swissprot
ID Q9EPI1
description Xylosyltransferase 1 (Fragment) OS=Rattus norvegicus GN=Xylt1 PE=2 SV=1
trembl
ID A0A067JK10
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06426 PE=4 SV=1
Gene Ontology
ID GO:0005794
description xylosyltransferase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14681: 62256-65570 , PASA_asmbl_14682: 62256-65570
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001623_110 0.0 - - PREDICTED: xylosyltransferase 1 [Jatropha curcas]
2 Hb_012760_030 0.0687463161 - - PREDICTED: probable prolyl 4-hydroxylase 10 [Gossypium raimondii]
3 Hb_000300_550 0.076415181 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
4 Hb_000580_030 0.0791568106 - - PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]
5 Hb_006022_010 0.0795759652 - - PREDICTED: uncharacterized protein LOC105628883 [Jatropha curcas]
6 Hb_007800_020 0.0799784402 - - PREDICTED: probable arabinosyltransferase ARAD1 isoform X1 [Jatropha curcas]
7 Hb_000805_210 0.0829780212 - - PREDICTED: oxysterol-binding protein-related protein 3C-like [Jatropha curcas]
8 Hb_000890_030 0.0844746225 - - plastid CUL1 [Hevea brasiliensis]
9 Hb_005322_050 0.0845566188 - - hypothetical protein POPTR_0009s02400g [Populus trichocarpa]
10 Hb_044486_020 0.0874668897 - - CASTOR protein [Glycine max]
11 Hb_000784_080 0.0893417073 - - protein disulfide isomerase, putative [Ricinus communis]
12 Hb_000671_030 0.0927993557 - - PREDICTED: probable pectin methyltransferase QUA2 [Jatropha curcas]
13 Hb_027654_020 0.0952724008 - - PREDICTED: LIMR family protein At5g01460 [Jatropha curcas]
14 Hb_083628_010 0.0961632785 - - PREDICTED: probable serine protease EDA2 [Jatropha curcas]
15 Hb_000054_040 0.09841181 - - PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [Jatropha curcas]
16 Hb_000098_050 0.0994858856 - - BnaCnng11900D [Brassica napus]
17 Hb_000622_340 0.099703462 - - PREDICTED: UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 [Jatropha curcas]
18 Hb_002311_190 0.1006410581 - - PREDICTED: uncharacterized protein LOC105643493 [Jatropha curcas]
19 Hb_000958_080 0.1014270147 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000635_040 0.1034407557 - - PREDICTED: nuclear pore complex protein NUP54 [Jatropha curcas]

Gene co-expression network

sample Hb_001623_110 Hb_001623_110 Hb_012760_030 Hb_012760_030 Hb_001623_110--Hb_012760_030 Hb_000300_550 Hb_000300_550 Hb_001623_110--Hb_000300_550 Hb_000580_030 Hb_000580_030 Hb_001623_110--Hb_000580_030 Hb_006022_010 Hb_006022_010 Hb_001623_110--Hb_006022_010 Hb_007800_020 Hb_007800_020 Hb_001623_110--Hb_007800_020 Hb_000805_210 Hb_000805_210 Hb_001623_110--Hb_000805_210 Hb_000784_080 Hb_000784_080 Hb_012760_030--Hb_000784_080 Hb_000890_030 Hb_000890_030 Hb_012760_030--Hb_000890_030 Hb_000671_030 Hb_000671_030 Hb_012760_030--Hb_000671_030 Hb_007919_110 Hb_007919_110 Hb_012760_030--Hb_007919_110 Hb_004724_390 Hb_004724_390 Hb_012760_030--Hb_004724_390 Hb_005322_050 Hb_005322_050 Hb_000300_550--Hb_005322_050 Hb_000300_550--Hb_006022_010 Hb_027654_020 Hb_027654_020 Hb_000300_550--Hb_027654_020 Hb_172257_010 Hb_172257_010 Hb_000300_550--Hb_172257_010 Hb_000302_170 Hb_000302_170 Hb_000300_550--Hb_000302_170 Hb_000640_190 Hb_000640_190 Hb_000300_550--Hb_000640_190 Hb_001489_100 Hb_001489_100 Hb_000580_030--Hb_001489_100 Hb_000580_030--Hb_000890_030 Hb_000580_030--Hb_007800_020 Hb_000580_030--Hb_027654_020 Hb_000580_030--Hb_005322_050 Hb_000046_600 Hb_000046_600 Hb_006022_010--Hb_000046_600 Hb_006022_010--Hb_000640_190 Hb_006022_010--Hb_007800_020 Hb_002249_020 Hb_002249_020 Hb_006022_010--Hb_002249_020 Hb_000635_040 Hb_000635_040 Hb_007800_020--Hb_000635_040 Hb_000640_070 Hb_000640_070 Hb_007800_020--Hb_000640_070 Hb_005895_010 Hb_005895_010 Hb_007800_020--Hb_005895_010 Hb_000362_170 Hb_000362_170 Hb_007800_020--Hb_000362_170 Hb_000608_350 Hb_000608_350 Hb_007800_020--Hb_000608_350 Hb_001002_060 Hb_001002_060 Hb_007800_020--Hb_001002_060 Hb_002615_070 Hb_002615_070 Hb_000805_210--Hb_002615_070 Hb_000805_210--Hb_000890_030 Hb_000805_210--Hb_012760_030 Hb_000958_080 Hb_000958_080 Hb_000805_210--Hb_000958_080 Hb_083628_010 Hb_083628_010 Hb_000805_210--Hb_083628_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.8745 28.9028 29.7738 42.9986 24.9596 14.2465
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.25132 8.34521 8.69274 14.2866 18.4228

CAGE analysis