Hb_000805_210

Information

Type -
Description -
Location Contig805: 202695-203250
Sequence    

Annotation

kegg
ID pxb:103954294
description oxysterol-binding protein-related protein 3C-like
nr
ID XP_012067017.1
description PREDICTED: oxysterol-binding protein-related protein 3C-like [Jatropha curcas]
swissprot
ID Q93Y40
description Oxysterol-binding protein-related protein 3C OS=Arabidopsis thaliana GN=ORP3C PE=2 SV=1
trembl
ID A0A067L4Y1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02983 PE=3 SV=1
Gene Ontology
ID GO:0005829
description oxysterol-binding protein 3c

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58986: 202444-219352 , PASA_asmbl_58987: 202444-225161
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000805_210 0.0 - - PREDICTED: oxysterol-binding protein-related protein 3C-like [Jatropha curcas]
2 Hb_002615_070 0.0608087584 - - PREDICTED: uncharacterized protein LOC105628992 isoform X1 [Jatropha curcas]
3 Hb_000890_030 0.0785424976 - - plastid CUL1 [Hevea brasiliensis]
4 Hb_001623_110 0.0829780212 - - PREDICTED: xylosyltransferase 1 [Jatropha curcas]
5 Hb_012760_030 0.0838577101 - - PREDICTED: probable prolyl 4-hydroxylase 10 [Gossypium raimondii]
6 Hb_000958_080 0.0881033987 - - conserved hypothetical protein [Ricinus communis]
7 Hb_083628_010 0.0885118132 - - PREDICTED: probable serine protease EDA2 [Jatropha curcas]
8 Hb_000300_550 0.0885662928 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
9 Hb_009222_070 0.08996441 - - PREDICTED: xylosyltransferase 2 [Jatropha curcas]
10 Hb_007919_110 0.0911100908 - - PREDICTED: UDP-galactose transporter 2-like [Jatropha curcas]
11 Hb_007163_060 0.0949323956 - - PREDICTED: protein RMD5 homolog A [Jatropha curcas]
12 Hb_005322_050 0.098798726 - - hypothetical protein POPTR_0009s02400g [Populus trichocarpa]
13 Hb_003449_100 0.1000902032 - - PREDICTED: protein YIPF6 homolog [Jatropha curcas]
14 Hb_164945_010 0.1012440973 - - PREDICTED: DNA primase small subunit [Jatropha curcas]
15 Hb_161568_010 0.1032594237 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
16 Hb_005381_020 0.1040321843 - - PREDICTED: uncharacterized protein LOC105630417 [Jatropha curcas]
17 Hb_007800_020 0.1049021206 - - PREDICTED: probable arabinosyltransferase ARAD1 isoform X1 [Jatropha curcas]
18 Hb_004096_160 0.1058606406 - - PREDICTED: T-complex protein 1 subunit zeta 1 [Jatropha curcas]
19 Hb_162060_010 0.1068729435 - - conserved hypothetical protein [Ricinus communis]
20 Hb_027654_020 0.1069097581 - - PREDICTED: LIMR family protein At5g01460 [Jatropha curcas]

Gene co-expression network

sample Hb_000805_210 Hb_000805_210 Hb_002615_070 Hb_002615_070 Hb_000805_210--Hb_002615_070 Hb_000890_030 Hb_000890_030 Hb_000805_210--Hb_000890_030 Hb_001623_110 Hb_001623_110 Hb_000805_210--Hb_001623_110 Hb_012760_030 Hb_012760_030 Hb_000805_210--Hb_012760_030 Hb_000958_080 Hb_000958_080 Hb_000805_210--Hb_000958_080 Hb_083628_010 Hb_083628_010 Hb_000805_210--Hb_083628_010 Hb_007919_110 Hb_007919_110 Hb_002615_070--Hb_007919_110 Hb_000703_160 Hb_000703_160 Hb_002615_070--Hb_000703_160 Hb_003449_100 Hb_003449_100 Hb_002615_070--Hb_003449_100 Hb_002615_070--Hb_000958_080 Hb_005535_080 Hb_005535_080 Hb_002615_070--Hb_005535_080 Hb_000580_030 Hb_000580_030 Hb_000890_030--Hb_000580_030 Hb_000890_030--Hb_012760_030 Hb_016461_020 Hb_016461_020 Hb_000890_030--Hb_016461_020 Hb_000098_050 Hb_000098_050 Hb_000890_030--Hb_000098_050 Hb_044486_020 Hb_044486_020 Hb_000890_030--Hb_044486_020 Hb_001623_110--Hb_012760_030 Hb_000300_550 Hb_000300_550 Hb_001623_110--Hb_000300_550 Hb_001623_110--Hb_000580_030 Hb_006022_010 Hb_006022_010 Hb_001623_110--Hb_006022_010 Hb_007800_020 Hb_007800_020 Hb_001623_110--Hb_007800_020 Hb_000784_080 Hb_000784_080 Hb_012760_030--Hb_000784_080 Hb_000671_030 Hb_000671_030 Hb_012760_030--Hb_000671_030 Hb_012760_030--Hb_007919_110 Hb_004724_390 Hb_004724_390 Hb_012760_030--Hb_004724_390 Hb_004096_160 Hb_004096_160 Hb_000958_080--Hb_004096_160 Hb_009449_060 Hb_009449_060 Hb_000958_080--Hb_009449_060 Hb_005322_050 Hb_005322_050 Hb_000958_080--Hb_005322_050 Hb_000089_210 Hb_000089_210 Hb_000958_080--Hb_000089_210 Hb_002909_040 Hb_002909_040 Hb_000958_080--Hb_002909_040 Hb_005730_010 Hb_005730_010 Hb_000958_080--Hb_005730_010 Hb_164945_010 Hb_164945_010 Hb_083628_010--Hb_164945_010 Hb_083628_010--Hb_001623_110 Hb_000836_300 Hb_000836_300 Hb_083628_010--Hb_000836_300 Hb_083628_010--Hb_012760_030 Hb_009222_070 Hb_009222_070 Hb_083628_010--Hb_009222_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
41.9194 71.4715 99.2796 120.625 48.1958 43.9732
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.7465 25.9004 30.627 35.6145 32.7215

CAGE analysis