Hb_000640_190

Information

Type -
Description -
Location Contig640: 143764-151106
Sequence    

Annotation

kegg
ID pop:POPTR_0002s19550g
description POPTRDRAFT_409553; hypothetical protein
nr
ID XP_012082910.1
description PREDICTED: proline-rich receptor-like protein kinase PERK3 isoform X1 [Jatropha curcas]
swissprot
ID Q8RWW0
description Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1
trembl
ID A0A067JWE5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14042 PE=3 SV=1
Gene Ontology
ID GO:0005886
description receptor-like serine threonine-protein kinase ale2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52106: 143844-151334
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000640_190 0.0 - - PREDICTED: proline-rich receptor-like protein kinase PERK3 isoform X1 [Jatropha curcas]
2 Hb_033152_090 0.0567833182 - - PREDICTED: serine/threonine-protein kinase SRK2E isoform X2 [Gossypium raimondii]
3 Hb_005403_010 0.0626210605 - - PREDICTED: exocyst complex component EXO70B1-like [Jatropha curcas]
4 Hb_001009_120 0.0648933427 - - PREDICTED: transcription factor GTE10 isoform X2 [Jatropha curcas]
5 Hb_002249_020 0.0652419488 - - PREDICTED: dual specificity protein phosphatase PHS1 [Jatropha curcas]
6 Hb_000300_550 0.0696963684 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
7 Hb_000045_160 0.0704707922 - - PREDICTED: glycosyltransferase family 64 protein C4 [Jatropha curcas]
8 Hb_005288_140 0.0763396865 - - PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-like [Jatropha curcas]
9 Hb_003925_060 0.0772616338 - - PREDICTED: uncharacterized protein LOC105645218 isoform X1 [Jatropha curcas]
10 Hb_006022_010 0.0778214017 - - PREDICTED: uncharacterized protein LOC105628883 [Jatropha curcas]
11 Hb_000956_040 0.0798822535 - - PREDICTED: probable E3 ubiquitin-protein ligase HIP1 [Jatropha curcas]
12 Hb_003777_130 0.0799510513 - - PREDICTED: uncharacterized protein LOC105640939 [Jatropha curcas]
13 Hb_152910_010 0.0799547613 - - PREDICTED: uncharacterized protein LOC105632212 [Jatropha curcas]
14 Hb_004319_050 0.0813882091 - - PREDICTED: senescence-associated carboxylesterase 101-like [Populus euphratica]
15 Hb_009178_010 0.0816358646 - - PREDICTED: uncharacterized protein LOC105637474 [Jatropha curcas]
16 Hb_172257_010 0.0858590654 transcription factor TF Family: HMG high mobility group family protein [Populus trichocarpa]
17 Hb_001699_010 0.0862577431 - - drought-inducible protein [Manihot esculenta]
18 Hb_000258_420 0.0863665711 - - sucrose transporter 2A [Hevea brasiliensis]
19 Hb_000046_600 0.0869799732 - - PREDICTED: cullin-1-like [Jatropha curcas]
20 Hb_000261_280 0.0897230779 - - BnaA10g23810D [Brassica napus]

Gene co-expression network

sample Hb_000640_190 Hb_000640_190 Hb_033152_090 Hb_033152_090 Hb_000640_190--Hb_033152_090 Hb_005403_010 Hb_005403_010 Hb_000640_190--Hb_005403_010 Hb_001009_120 Hb_001009_120 Hb_000640_190--Hb_001009_120 Hb_002249_020 Hb_002249_020 Hb_000640_190--Hb_002249_020 Hb_000300_550 Hb_000300_550 Hb_000640_190--Hb_000300_550 Hb_000045_160 Hb_000045_160 Hb_000640_190--Hb_000045_160 Hb_000258_420 Hb_000258_420 Hb_033152_090--Hb_000258_420 Hb_033152_090--Hb_001009_120 Hb_000956_040 Hb_000956_040 Hb_033152_090--Hb_000956_040 Hb_000815_310 Hb_000815_310 Hb_033152_090--Hb_000815_310 Hb_003777_130 Hb_003777_130 Hb_033152_090--Hb_003777_130 Hb_170077_010 Hb_170077_010 Hb_005403_010--Hb_170077_010 Hb_000046_600 Hb_000046_600 Hb_005403_010--Hb_000046_600 Hb_023344_140 Hb_023344_140 Hb_005403_010--Hb_023344_140 Hb_000110_350 Hb_000110_350 Hb_005403_010--Hb_000110_350 Hb_000260_760 Hb_000260_760 Hb_005403_010--Hb_000260_760 Hb_001009_120--Hb_000956_040 Hb_006452_180 Hb_006452_180 Hb_001009_120--Hb_006452_180 Hb_004319_050 Hb_004319_050 Hb_001009_120--Hb_004319_050 Hb_009178_010 Hb_009178_010 Hb_001009_120--Hb_009178_010 Hb_006846_170 Hb_006846_170 Hb_002249_020--Hb_006846_170 Hb_003449_100 Hb_003449_100 Hb_002249_020--Hb_003449_100 Hb_003925_060 Hb_003925_060 Hb_002249_020--Hb_003925_060 Hb_006022_010 Hb_006022_010 Hb_002249_020--Hb_006022_010 Hb_003228_100 Hb_003228_100 Hb_002249_020--Hb_003228_100 Hb_005322_050 Hb_005322_050 Hb_000300_550--Hb_005322_050 Hb_000300_550--Hb_006022_010 Hb_027654_020 Hb_027654_020 Hb_000300_550--Hb_027654_020 Hb_172257_010 Hb_172257_010 Hb_000300_550--Hb_172257_010 Hb_000302_170 Hb_000302_170 Hb_000300_550--Hb_000302_170 Hb_011930_100 Hb_011930_100 Hb_000045_160--Hb_011930_100 Hb_000045_160--Hb_033152_090 Hb_088584_010 Hb_088584_010 Hb_000045_160--Hb_088584_010 Hb_000045_160--Hb_002249_020 Hb_000045_160--Hb_000815_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.6435 30.5779 33.9659 24.2035 12.3712 11.5504
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.42873 6.53343 7.67186 11.7184 16.8003

CAGE analysis