Hb_005403_010

Information

Type -
Description -
Location Contig5403: 32246-34165
Sequence    

Annotation

kegg
ID rcu:RCOM_1240130
description protein binding protein, putative
nr
ID XP_012078692.1
description PREDICTED: exocyst complex component EXO70B1-like [Jatropha curcas]
swissprot
ID Q9FGH9
description Exocyst complex component EXO70B1 OS=Arabidopsis thaliana GN=EXO70B1 PE=1 SV=1
trembl
ID A0A067LLW7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17362 PE=4 SV=1
Gene Ontology
ID GO:0000145
description exocyst complex component exo70b1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47848: 32218-34390
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005403_010 0.0 - - PREDICTED: exocyst complex component EXO70B1-like [Jatropha curcas]
2 Hb_170077_010 0.0472023044 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X1 [Jatropha curcas]
3 Hb_000046_600 0.0526356054 - - PREDICTED: cullin-1-like [Jatropha curcas]
4 Hb_023344_140 0.0611592626 - - PREDICTED: WD repeat-containing protein 70 [Jatropha curcas]
5 Hb_000640_190 0.0626210605 - - PREDICTED: proline-rich receptor-like protein kinase PERK3 isoform X1 [Jatropha curcas]
6 Hb_000110_350 0.06265649 - - PREDICTED: ubiquitin receptor RAD23c-like isoform X2 [Gossypium raimondii]
7 Hb_000260_760 0.0640377464 - - PREDICTED: protein EXPORTIN 1A [Jatropha curcas]
8 Hb_005333_140 0.0652401148 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform X1 [Jatropha curcas]
9 Hb_000529_060 0.0665866609 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 17 isoform X1 [Jatropha curcas]
10 Hb_001259_110 0.0679841669 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 3 [Jatropha curcas]
11 Hb_000977_300 0.0683183795 - - PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase ARI8 [Malus domestica]
12 Hb_002461_020 0.0702745779 - - PREDICTED: uncharacterized protein LOC105642649 isoform X2 [Jatropha curcas]
13 Hb_000034_110 0.072868007 - - sentrin/sumo-specific protease, putative [Ricinus communis]
14 Hb_005288_140 0.0733140619 - - PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-like [Jatropha curcas]
15 Hb_000030_140 0.0745141629 - - PREDICTED: general negative regulator of transcription subunit 3 isoform X1 [Jatropha curcas]
16 Hb_000179_190 0.0748675931 transcription factor TF Family: Alfin-like PREDICTED: PHD finger protein ALFIN-LIKE 4 isoform X1 [Vitis vinifera]
17 Hb_000300_550 0.0769325509 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
18 Hb_004319_050 0.0780617989 - - PREDICTED: senescence-associated carboxylesterase 101-like [Populus euphratica]
19 Hb_004659_090 0.0798103796 - - PREDICTED: uncharacterized protein LOC105629935 [Jatropha curcas]
20 Hb_000189_630 0.0800589925 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]

Gene co-expression network

sample Hb_005403_010 Hb_005403_010 Hb_170077_010 Hb_170077_010 Hb_005403_010--Hb_170077_010 Hb_000046_600 Hb_000046_600 Hb_005403_010--Hb_000046_600 Hb_023344_140 Hb_023344_140 Hb_005403_010--Hb_023344_140 Hb_000640_190 Hb_000640_190 Hb_005403_010--Hb_000640_190 Hb_000110_350 Hb_000110_350 Hb_005403_010--Hb_000110_350 Hb_000260_760 Hb_000260_760 Hb_005403_010--Hb_000260_760 Hb_170077_010--Hb_000110_350 Hb_170077_010--Hb_023344_140 Hb_000358_220 Hb_000358_220 Hb_170077_010--Hb_000358_220 Hb_000996_020 Hb_000996_020 Hb_170077_010--Hb_000996_020 Hb_002461_020 Hb_002461_020 Hb_170077_010--Hb_002461_020 Hb_000529_060 Hb_000529_060 Hb_000046_600--Hb_000529_060 Hb_000046_600--Hb_023344_140 Hb_005333_140 Hb_005333_140 Hb_000046_600--Hb_005333_140 Hb_000994_020 Hb_000994_020 Hb_000046_600--Hb_000994_020 Hb_000977_300 Hb_000977_300 Hb_000046_600--Hb_000977_300 Hb_023344_140--Hb_005333_140 Hb_023344_140--Hb_000358_220 Hb_023344_140--Hb_000996_020 Hb_033152_090 Hb_033152_090 Hb_000640_190--Hb_033152_090 Hb_001009_120 Hb_001009_120 Hb_000640_190--Hb_001009_120 Hb_002249_020 Hb_002249_020 Hb_000640_190--Hb_002249_020 Hb_000300_550 Hb_000300_550 Hb_000640_190--Hb_000300_550 Hb_000045_160 Hb_000045_160 Hb_000640_190--Hb_000045_160 Hb_000179_190 Hb_000179_190 Hb_000110_350--Hb_000179_190 Hb_003929_210 Hb_003929_210 Hb_000110_350--Hb_003929_210 Hb_002768_050 Hb_002768_050 Hb_000110_350--Hb_002768_050 Hb_000445_060 Hb_000445_060 Hb_000110_350--Hb_000445_060 Hb_000110_350--Hb_000996_020 Hb_000030_140 Hb_000030_140 Hb_000260_760--Hb_000030_140 Hb_000260_760--Hb_002461_020 Hb_000428_030 Hb_000428_030 Hb_000260_760--Hb_000428_030 Hb_000260_760--Hb_000996_020 Hb_009178_010 Hb_009178_010 Hb_000260_760--Hb_009178_010 Hb_000260_760--Hb_170077_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
19.4747 50.2044 43.5777 36.0806 22.7488 19.6848
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.4465 8.97495 13.9732 25.5147 30.2005

CAGE analysis