Hb_000045_160

Information

Type -
Description -
Location Contig45: 137806-142975
Sequence    

Annotation

kegg
ID rcu:RCOM_0592150
description Exostosin-2, putative (EC:2.4.1.223)
nr
ID XP_012087784.1
description PREDICTED: glycosyltransferase family 64 protein C4 [Jatropha curcas]
swissprot
ID Q9LY62
description Glycosyltransferase family 64 protein C4 OS=Arabidopsis thaliana GN=EPC1 PE=2 SV=1
trembl
ID A0A067LJJ0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01315 PE=4 SV=1
Gene Ontology
ID GO:0005768
description glycosyltransferase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43135: 137836-142836
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000045_160 0.0 - - PREDICTED: glycosyltransferase family 64 protein C4 [Jatropha curcas]
2 Hb_000640_190 0.0704707922 - - PREDICTED: proline-rich receptor-like protein kinase PERK3 isoform X1 [Jatropha curcas]
3 Hb_011930_100 0.0719389631 - - PREDICTED: dnaJ homolog subfamily B member 1 [Jatropha curcas]
4 Hb_033152_090 0.0924388883 - - PREDICTED: serine/threonine-protein kinase SRK2E isoform X2 [Gossypium raimondii]
5 Hb_088584_010 0.0988859705 - - hypothetical protein POPTR_0016s08470g [Populus trichocarpa]
6 Hb_002249_020 0.0999548996 - - PREDICTED: dual specificity protein phosphatase PHS1 [Jatropha curcas]
7 Hb_000815_310 0.1009197855 - - protein kinase, putative [Ricinus communis]
8 Hb_005403_010 0.1015384306 - - PREDICTED: exocyst complex component EXO70B1-like [Jatropha curcas]
9 Hb_003777_130 0.1025490846 - - PREDICTED: uncharacterized protein LOC105640939 [Jatropha curcas]
10 Hb_000631_090 0.1049845829 - - PREDICTED: uncharacterized protein LOC105640619 [Jatropha curcas]
11 Hb_000956_040 0.1077083001 - - PREDICTED: probable E3 ubiquitin-protein ligase HIP1 [Jatropha curcas]
12 Hb_006022_010 0.1088284774 - - PREDICTED: uncharacterized protein LOC105628883 [Jatropha curcas]
13 Hb_001396_070 0.1089611703 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001009_120 0.110747406 - - PREDICTED: transcription factor GTE10 isoform X2 [Jatropha curcas]
15 Hb_003177_070 0.1122112249 - - PREDICTED: ATP sulfurylase 2 [Jatropha curcas]
16 Hb_007777_010 0.1150457519 - - PREDICTED: UPF0187 protein At3g61320, chloroplastic [Tarenaya hassleriana]
17 Hb_003925_060 0.1154829417 - - PREDICTED: uncharacterized protein LOC105645218 isoform X1 [Jatropha curcas]
18 Hb_000470_110 0.1160559889 - - PREDICTED: probable LIM domain-containing serine/threonine-protein kinase DDB_G0287001 [Jatropha curcas]
19 Hb_005288_140 0.1163018148 - - PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-like [Jatropha curcas]
20 Hb_000258_420 0.1167228753 - - sucrose transporter 2A [Hevea brasiliensis]

Gene co-expression network

sample Hb_000045_160 Hb_000045_160 Hb_000640_190 Hb_000640_190 Hb_000045_160--Hb_000640_190 Hb_011930_100 Hb_011930_100 Hb_000045_160--Hb_011930_100 Hb_033152_090 Hb_033152_090 Hb_000045_160--Hb_033152_090 Hb_088584_010 Hb_088584_010 Hb_000045_160--Hb_088584_010 Hb_002249_020 Hb_002249_020 Hb_000045_160--Hb_002249_020 Hb_000815_310 Hb_000815_310 Hb_000045_160--Hb_000815_310 Hb_000640_190--Hb_033152_090 Hb_005403_010 Hb_005403_010 Hb_000640_190--Hb_005403_010 Hb_001009_120 Hb_001009_120 Hb_000640_190--Hb_001009_120 Hb_000640_190--Hb_002249_020 Hb_000300_550 Hb_000300_550 Hb_000640_190--Hb_000300_550 Hb_011930_100--Hb_000815_310 Hb_003777_130 Hb_003777_130 Hb_011930_100--Hb_003777_130 Hb_011930_100--Hb_000640_190 Hb_001396_070 Hb_001396_070 Hb_011930_100--Hb_001396_070 Hb_011930_100--Hb_033152_090 Hb_000258_420 Hb_000258_420 Hb_033152_090--Hb_000258_420 Hb_033152_090--Hb_001009_120 Hb_000956_040 Hb_000956_040 Hb_033152_090--Hb_000956_040 Hb_033152_090--Hb_000815_310 Hb_033152_090--Hb_003777_130 Hb_006846_170 Hb_006846_170 Hb_088584_010--Hb_006846_170 Hb_017214_040 Hb_017214_040 Hb_088584_010--Hb_017214_040 Hb_088584_010--Hb_002249_020 Hb_000069_610 Hb_000069_610 Hb_088584_010--Hb_000069_610 Hb_000179_190 Hb_000179_190 Hb_088584_010--Hb_000179_190 Hb_111552_010 Hb_111552_010 Hb_088584_010--Hb_111552_010 Hb_002249_020--Hb_006846_170 Hb_003449_100 Hb_003449_100 Hb_002249_020--Hb_003449_100 Hb_003925_060 Hb_003925_060 Hb_002249_020--Hb_003925_060 Hb_006022_010 Hb_006022_010 Hb_002249_020--Hb_006022_010 Hb_003228_100 Hb_003228_100 Hb_002249_020--Hb_003228_100 Hb_003540_250 Hb_003540_250 Hb_000815_310--Hb_003540_250 Hb_000815_310--Hb_003777_130 Hb_002965_050 Hb_002965_050 Hb_000815_310--Hb_002965_050 Hb_007416_260 Hb_007416_260 Hb_000815_310--Hb_007416_260 Hb_002876_210 Hb_002876_210 Hb_000815_310--Hb_002876_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.17377 6.73954 7.07762 5.84513 1.63631 2.68018
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.799546 0.966041 1.65087 2.30231 4.00749

CAGE analysis