Hb_111552_010

Information

Type -
Description -
Location Contig111552: 522-887
Sequence    

Annotation

kegg
ID mdm:103428614
description ATP sulfurylase 2-like
nr
ID XP_012073823.1
description PREDICTED: ATP sulfurylase 2 [Jatropha curcas]
swissprot
ID Q43870
description ATP sulfurylase 2 OS=Arabidopsis thaliana GN=APS2 PE=1 SV=1
trembl
ID A0A067KLD2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08233 PE=4 SV=1
Gene Ontology
ID GO:0005829
description atp sulfurylase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03517: 474-828
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_111552_010 0.0 - - PREDICTED: ATP sulfurylase 2 [Jatropha curcas]
2 Hb_004774_090 0.0624823908 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein At4g27190-like [Jatropha curcas]
3 Hb_001178_030 0.0672708249 - - PREDICTED: 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic [Jatropha curcas]
4 Hb_000452_030 0.0847905729 - - Protein phosphatase 1 regulatory subunit, putative [Ricinus communis]
5 Hb_000586_020 0.0863484263 desease resistance Gene Name: NB-ARC hypothetical protein F383_02497 [Gossypium arboreum]
6 Hb_006846_170 0.0922936575 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Jatropha curcas]
7 Hb_000956_040 0.0943950297 - - PREDICTED: probable E3 ubiquitin-protein ligase HIP1 [Jatropha curcas]
8 Hb_000179_190 0.0952004342 transcription factor TF Family: Alfin-like PREDICTED: PHD finger protein ALFIN-LIKE 4 isoform X1 [Vitis vinifera]
9 Hb_088584_010 0.0956731088 - - hypothetical protein POPTR_0016s08470g [Populus trichocarpa]
10 Hb_004324_360 0.0979453752 - - PREDICTED: uncharacterized protein LOC105650600 isoform X1 [Jatropha curcas]
11 Hb_009288_010 0.0980339548 desease resistance Gene Name: Clp_N ERD1 protein, chloroplast precursor, putative [Ricinus communis]
12 Hb_005305_130 0.0980379564 - - PREDICTED: sulfite reductase [ferredoxin], chloroplastic [Jatropha curcas]
13 Hb_000788_030 0.098341685 - - PREDICTED: dynamin-2A [Jatropha curcas]
14 Hb_000137_010 0.0990817719 - - PREDICTED: uncharacterized protein LOC105644349 [Jatropha curcas]
15 Hb_009158_060 0.0995491702 - - PREDICTED: CDPK-related kinase 3 [Jatropha curcas]
16 Hb_012799_050 0.101257281 - - PREDICTED: remorin [Jatropha curcas]
17 Hb_003408_060 0.1026252575 transcription factor TF Family: Orphans Salt-tolerance protein, putative [Ricinus communis]
18 Hb_000404_030 0.1039792012 - - PREDICTED: protein NAP1 [Jatropha curcas]
19 Hb_000317_110 0.1043121572 - - PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial isoform X2 [Jatropha curcas]
20 Hb_000748_090 0.1051713853 - - glucose inhibited division protein A, putative [Ricinus communis]

Gene co-expression network

sample Hb_111552_010 Hb_111552_010 Hb_004774_090 Hb_004774_090 Hb_111552_010--Hb_004774_090 Hb_001178_030 Hb_001178_030 Hb_111552_010--Hb_001178_030 Hb_000452_030 Hb_000452_030 Hb_111552_010--Hb_000452_030 Hb_000586_020 Hb_000586_020 Hb_111552_010--Hb_000586_020 Hb_006846_170 Hb_006846_170 Hb_111552_010--Hb_006846_170 Hb_000956_040 Hb_000956_040 Hb_111552_010--Hb_000956_040 Hb_004324_360 Hb_004324_360 Hb_004774_090--Hb_004324_360 Hb_004774_090--Hb_000956_040 Hb_000975_210 Hb_000975_210 Hb_004774_090--Hb_000975_210 Hb_000788_030 Hb_000788_030 Hb_004774_090--Hb_000788_030 Hb_000137_010 Hb_000137_010 Hb_004774_090--Hb_000137_010 Hb_001178_030--Hb_000586_020 Hb_005305_130 Hb_005305_130 Hb_001178_030--Hb_005305_130 Hb_000806_030 Hb_000806_030 Hb_001178_030--Hb_000806_030 Hb_002249_030 Hb_002249_030 Hb_001178_030--Hb_002249_030 Hb_000404_030 Hb_000404_030 Hb_001178_030--Hb_000404_030 Hb_000015_090 Hb_000015_090 Hb_000452_030--Hb_000015_090 Hb_003687_130 Hb_003687_130 Hb_000452_030--Hb_003687_130 Hb_002259_170 Hb_002259_170 Hb_000452_030--Hb_002259_170 Hb_000979_140 Hb_000979_140 Hb_000452_030--Hb_000979_140 Hb_000015_200 Hb_000015_200 Hb_000452_030--Hb_000015_200 Hb_000586_020--Hb_000404_030 Hb_000586_020--Hb_004774_090 Hb_000586_020--Hb_002249_030 Hb_068804_090 Hb_068804_090 Hb_000586_020--Hb_068804_090 Hb_002249_020 Hb_002249_020 Hb_006846_170--Hb_002249_020 Hb_006846_170--Hb_000788_030 Hb_003228_100 Hb_003228_100 Hb_006846_170--Hb_003228_100 Hb_006846_170--Hb_000975_210 Hb_088584_010 Hb_088584_010 Hb_006846_170--Hb_088584_010 Hb_023344_140 Hb_023344_140 Hb_006846_170--Hb_023344_140 Hb_005305_100 Hb_005305_100 Hb_000956_040--Hb_005305_100 Hb_000034_110 Hb_000034_110 Hb_000956_040--Hb_000034_110 Hb_033152_090 Hb_033152_090 Hb_000956_040--Hb_033152_090 Hb_001009_120 Hb_001009_120 Hb_000956_040--Hb_001009_120 Hb_010287_020 Hb_010287_020 Hb_000956_040--Hb_010287_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.355 45.7782 50.3778 34.5028 13.9789 19.1718
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.8933 10.8395 25.2503 21.5824 45.7736

CAGE analysis