Hb_000613_010

Information

Type -
Description -
Location Contig613: 7951-9657
Sequence    

Annotation

kegg
ID rcu:RCOM_1213440
description hypothetical protein
nr
ID XP_012089618.1
description PREDICTED: uncharacterized protein LOC105647991 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JGF2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01728 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000613_010 0.0 - - PREDICTED: uncharacterized protein LOC105647991 [Jatropha curcas]
2 Hb_000984_270 0.106268066 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000172_350 0.1191977306 - - PREDICTED: uncharacterized protein LOC105650963 [Jatropha curcas]
4 Hb_000136_140 0.1212353294 - - PREDICTED: uncharacterized protein LOC105648960 [Jatropha curcas]
5 Hb_011486_040 0.1226074225 - - PREDICTED: protein trichome birefringence-like 13 [Jatropha curcas]
6 Hb_001981_040 0.130410389 transcription factor TF Family: PHD PREDICTED: origin of replication complex subunit 1B-like [Jatropha curcas]
7 Hb_009020_040 0.1315754647 - - PREDICTED: triacylglycerol lipase 1 isoform X1 [Jatropha curcas]
8 Hb_001604_120 0.1315902041 - - PREDICTED: hemK methyltransferase family member 1 isoform X2 [Jatropha curcas]
9 Hb_000579_240 0.1331647873 - - phosphatidylinositol transporter, putative [Ricinus communis]
10 Hb_021495_020 0.1339319084 - - chitinase, putative [Ricinus communis]
11 Hb_000135_030 0.1339932151 - - PREDICTED: uncharacterized protein LOC105634729 isoform X1 [Jatropha curcas]
12 Hb_000244_180 0.1361215771 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002631_070 0.1370324109 - - PREDICTED: uncharacterized membrane protein At1g16860-like [Jatropha curcas]
14 Hb_001675_190 0.1390770551 - - PREDICTED: probable plastidic glucose transporter 3 [Jatropha curcas]
15 Hb_001491_030 0.1396168178 - - PREDICTED: uncharacterized protein LOC105649804 isoform X1 [Jatropha curcas]
16 Hb_004680_120 0.1398869899 - - PREDICTED: UDP-glucuronic acid decarboxylase 1 [Jatropha curcas]
17 Hb_001828_040 0.1451046673 - - PREDICTED: F-box protein SKIP14 [Jatropha curcas]
18 Hb_000056_130 0.1465791465 - - Sucrose Transporter 2C [Hevea brasiliensis subsp. brasiliensis]
19 Hb_007101_080 0.1466422355 transcription factor TF Family: GNAT GCN5-related N-acetyltransferase family protein [Populus trichocarpa]
20 Hb_001640_030 0.1467869797 - - PREDICTED: uncharacterized protein LOC105630021 [Jatropha curcas]

Gene co-expression network

sample Hb_000613_010 Hb_000613_010 Hb_000984_270 Hb_000984_270 Hb_000613_010--Hb_000984_270 Hb_000172_350 Hb_000172_350 Hb_000613_010--Hb_000172_350 Hb_000136_140 Hb_000136_140 Hb_000613_010--Hb_000136_140 Hb_011486_040 Hb_011486_040 Hb_000613_010--Hb_011486_040 Hb_001981_040 Hb_001981_040 Hb_000613_010--Hb_001981_040 Hb_009020_040 Hb_009020_040 Hb_000613_010--Hb_009020_040 Hb_001604_120 Hb_001604_120 Hb_000984_270--Hb_001604_120 Hb_006846_070 Hb_006846_070 Hb_000984_270--Hb_006846_070 Hb_000108_050 Hb_000108_050 Hb_000984_270--Hb_000108_050 Hb_005672_020 Hb_005672_020 Hb_000984_270--Hb_005672_020 Hb_000135_030 Hb_000135_030 Hb_000984_270--Hb_000135_030 Hb_005250_010 Hb_005250_010 Hb_000172_350--Hb_005250_010 Hb_000934_110 Hb_000934_110 Hb_000172_350--Hb_000934_110 Hb_022250_010 Hb_022250_010 Hb_000172_350--Hb_022250_010 Hb_001801_020 Hb_001801_020 Hb_000172_350--Hb_001801_020 Hb_000562_050 Hb_000562_050 Hb_000172_350--Hb_000562_050 Hb_006355_020 Hb_006355_020 Hb_000172_350--Hb_006355_020 Hb_000365_100 Hb_000365_100 Hb_000136_140--Hb_000365_100 Hb_001512_040 Hb_001512_040 Hb_000136_140--Hb_001512_040 Hb_000244_180 Hb_000244_180 Hb_000136_140--Hb_000244_180 Hb_012573_050 Hb_012573_050 Hb_000136_140--Hb_012573_050 Hb_000836_290 Hb_000836_290 Hb_000136_140--Hb_000836_290 Hb_006810_030 Hb_006810_030 Hb_000136_140--Hb_006810_030 Hb_004531_140 Hb_004531_140 Hb_011486_040--Hb_004531_140 Hb_152202_010 Hb_152202_010 Hb_011486_040--Hb_152202_010 Hb_001898_210 Hb_001898_210 Hb_011486_040--Hb_001898_210 Hb_001640_030 Hb_001640_030 Hb_011486_040--Hb_001640_030 Hb_002496_020 Hb_002496_020 Hb_011486_040--Hb_002496_020 Hb_000370_020 Hb_000370_020 Hb_011486_040--Hb_000370_020 Hb_000205_140 Hb_000205_140 Hb_001981_040--Hb_000205_140 Hb_079526_040 Hb_079526_040 Hb_001981_040--Hb_079526_040 Hb_000637_150 Hb_000637_150 Hb_001981_040--Hb_000637_150 Hb_031091_020 Hb_031091_020 Hb_001981_040--Hb_031091_020 Hb_001518_080 Hb_001518_080 Hb_001981_040--Hb_001518_080 Hb_000207_300 Hb_000207_300 Hb_001981_040--Hb_000207_300 Hb_001220_050 Hb_001220_050 Hb_009020_040--Hb_001220_050 Hb_000200_350 Hb_000200_350 Hb_009020_040--Hb_000200_350 Hb_000388_150 Hb_000388_150 Hb_009020_040--Hb_000388_150 Hb_009020_040--Hb_005250_010 Hb_002232_390 Hb_002232_390 Hb_009020_040--Hb_002232_390 Hb_003475_020 Hb_003475_020 Hb_009020_040--Hb_003475_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
45.975 9.57748 44.4475 65.8493 44.9679 43.8584
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
20.0491 12.8271 42.4578 27.0625 92.8106

CAGE analysis