Hb_000205_140

Information

Type -
Description -
Location Contig205: 218278-223545
Sequence    

Annotation

kegg
ID rcu:RCOM_0609590
description protein binding protein, putative
nr
ID XP_012089352.1
description PREDICTED: uncharacterized protein LOC105647751 [Jatropha curcas]
swissprot
ID Q86YJ7
description Ankyrin repeat domain-containing protein 13B OS=Homo sapiens GN=ANKRD13B PE=1 SV=4
trembl
ID A0A067JIQ2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23555 PE=4 SV=1
Gene Ontology
ID GO:0005886
description ankyrin repeat domain-containing protein 13c-b

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21112: 217236-220702 , PASA_asmbl_21114: 217910-223498
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000205_140 0.0 - - PREDICTED: uncharacterized protein LOC105647751 [Jatropha curcas]
2 Hb_079526_040 0.0744585003 - - Conserved oligomeric Golgi complex component, putative [Ricinus communis]
3 Hb_001981_040 0.081830903 transcription factor TF Family: PHD PREDICTED: origin of replication complex subunit 1B-like [Jatropha curcas]
4 Hb_091296_010 0.0848367565 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
5 Hb_003025_100 0.0864413626 - - PREDICTED: serine/threonine-protein phosphatase 5 isoform X2 [Jatropha curcas]
6 Hb_006153_070 0.0866689183 - - 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic [Jatropha curcas]
7 Hb_001518_080 0.088040269 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105646545 [Jatropha curcas]
8 Hb_009898_050 0.0891048847 - - PREDICTED: beta-taxilin [Jatropha curcas]
9 Hb_000244_180 0.0903438467 - - conserved hypothetical protein [Ricinus communis]
10 Hb_003878_150 0.0912535578 - - PREDICTED: GPI mannosyltransferase 3 [Jatropha curcas]
11 Hb_041290_020 0.0915948994 - - PREDICTED: centromere/kinetochore protein zw10 homolog isoform X2 [Jatropha curcas]
12 Hb_001269_330 0.0924510886 - - PREDICTED: uncharacterized protein LOC105645377 [Jatropha curcas]
13 Hb_012498_010 0.0938567099 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM44-2 [Jatropha curcas]
14 Hb_000256_150 0.0943175385 - - PREDICTED: trafficking protein particle complex II-specific subunit 120 homolog [Jatropha curcas]
15 Hb_005725_130 0.0944501562 - - PREDICTED: uncharacterized protein KIAA0930 homolog isoform X2 [Jatropha curcas]
16 Hb_005291_050 0.0955564942 - - PREDICTED: mannan endo-1,4-beta-mannosidase 6-like isoform X1 [Jatropha curcas]
17 Hb_004159_020 0.0976346272 - - Putative dihydrodipicolinate reductase 2, chloroplastic [Aegilops tauschii]
18 Hb_005650_010 0.098544107 - - ATP binding protein, putative [Ricinus communis]
19 Hb_001195_400 0.10021408 - - glucose-6-phosphate isomerase, putative [Ricinus communis]
20 Hb_133702_010 0.1007815808 - - PREDICTED: reticulon-4-interacting protein 1, mitochondrial isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000205_140 Hb_000205_140 Hb_079526_040 Hb_079526_040 Hb_000205_140--Hb_079526_040 Hb_001981_040 Hb_001981_040 Hb_000205_140--Hb_001981_040 Hb_091296_010 Hb_091296_010 Hb_000205_140--Hb_091296_010 Hb_003025_100 Hb_003025_100 Hb_000205_140--Hb_003025_100 Hb_006153_070 Hb_006153_070 Hb_000205_140--Hb_006153_070 Hb_001518_080 Hb_001518_080 Hb_000205_140--Hb_001518_080 Hb_079526_040--Hb_001518_080 Hb_000078_140 Hb_000078_140 Hb_079526_040--Hb_000078_140 Hb_003581_200 Hb_003581_200 Hb_079526_040--Hb_003581_200 Hb_159809_070 Hb_159809_070 Hb_079526_040--Hb_159809_070 Hb_000046_500 Hb_000046_500 Hb_079526_040--Hb_000046_500 Hb_005650_010 Hb_005650_010 Hb_079526_040--Hb_005650_010 Hb_001981_040--Hb_079526_040 Hb_000637_150 Hb_000637_150 Hb_001981_040--Hb_000637_150 Hb_031091_020 Hb_031091_020 Hb_001981_040--Hb_031091_020 Hb_001981_040--Hb_001518_080 Hb_000207_300 Hb_000207_300 Hb_001981_040--Hb_000207_300 Hb_091296_010--Hb_003025_100 Hb_001936_130 Hb_001936_130 Hb_091296_010--Hb_001936_130 Hb_004159_020 Hb_004159_020 Hb_091296_010--Hb_004159_020 Hb_004108_160 Hb_004108_160 Hb_091296_010--Hb_004108_160 Hb_001818_100 Hb_001818_100 Hb_091296_010--Hb_001818_100 Hb_003025_100--Hb_001818_100 Hb_000260_350 Hb_000260_350 Hb_003025_100--Hb_000260_350 Hb_012498_010 Hb_012498_010 Hb_003025_100--Hb_012498_010 Hb_000116_270 Hb_000116_270 Hb_003025_100--Hb_000116_270 Hb_006478_020 Hb_006478_020 Hb_003025_100--Hb_006478_020 Hb_009898_050 Hb_009898_050 Hb_006153_070--Hb_009898_050 Hb_000110_310 Hb_000110_310 Hb_006153_070--Hb_000110_310 Hb_007831_010 Hb_007831_010 Hb_006153_070--Hb_007831_010 Hb_168978_030 Hb_168978_030 Hb_006153_070--Hb_168978_030 Hb_000640_170 Hb_000640_170 Hb_006153_070--Hb_000640_170 Hb_000579_120 Hb_000579_120 Hb_006153_070--Hb_000579_120 Hb_000635_090 Hb_000635_090 Hb_001518_080--Hb_000635_090 Hb_000214_050 Hb_000214_050 Hb_001518_080--Hb_000214_050 Hb_002027_080 Hb_002027_080 Hb_001518_080--Hb_002027_080 Hb_002811_270 Hb_002811_270 Hb_001518_080--Hb_002811_270 Hb_015807_050 Hb_015807_050 Hb_001518_080--Hb_015807_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.5157 3.90721 12.1048 14.9162 7.33814 10.2936
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.46572 8.93704 11.1909 11.4819 14.4079

CAGE analysis