Hb_031091_020

Information

Type -
Description -
Location Contig31091: 43602-55635
Sequence    

Annotation

kegg
ID sot:102583961
description uncharacterized LOC102583961
nr
ID XP_012066659.1
description PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L1T8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00233 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32940: 46115-55416
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031091_020 0.0 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
2 Hb_002027_080 0.0750157618 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105650047 [Jatropha curcas]
3 Hb_000181_100 0.0753577227 - - PREDICTED: protein starmaker [Jatropha curcas]
4 Hb_000320_470 0.0757106073 - - calcium-dependent protein kinase [Hevea brasiliensis]
5 Hb_001518_080 0.077128791 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105646545 [Jatropha curcas]
6 Hb_003186_020 0.0771370753 - - PREDICTED: histone deacetylase 15 isoform X1 [Jatropha curcas]
7 Hb_000635_090 0.0802649488 - - PREDICTED: probable arabinosyltransferase ARAD1 [Jatropha curcas]
8 Hb_000175_410 0.0813611881 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X2 [Jatropha curcas]
9 Hb_028960_020 0.0816334144 - - PREDICTED: uncharacterized protein LOC105646163 isoform X1 [Jatropha curcas]
10 Hb_000665_120 0.0849926335 transcription factor TF Family: SET PREDICTED: uncharacterized protein LOC105637593 [Jatropha curcas]
11 Hb_000214_050 0.0851504427 - - PREDICTED: protein IQ-DOMAIN 1 isoform X1 [Jatropha curcas]
12 Hb_000252_050 0.0861616999 - - PREDICTED: pentatricopeptide repeat-containing protein At1g60770 [Jatropha curcas]
13 Hb_004096_240 0.0861781402 - - PREDICTED: uncharacterized protein LOC105638702 [Jatropha curcas]
14 Hb_005601_020 0.0883170596 - - PREDICTED: ankyrin repeat domain-containing protein 2 [Jatropha curcas]
15 Hb_021374_010 0.0884224863 transcription factor TF Family: NAC PREDICTED: NAC transcription factor NAM-A1 [Populus euphratica]
16 Hb_002774_190 0.0892444686 - - Endoplasmic reticulum-Golgi intermediate compartment protein, putative [Ricinus communis]
17 Hb_132840_110 0.0896124751 rubber biosynthesis Gene Name: Pyruvate dehydrogenase pyruvate dehydrogenase, putative [Ricinus communis]
18 Hb_031284_010 0.0906827498 - - PREDICTED: uncharacterized protein LOC105633543 [Jatropha curcas]
19 Hb_021374_030 0.0907804387 - - hypothetical protein RCOM_0351490 [Ricinus communis]
20 Hb_003581_200 0.091300806 - - PREDICTED: uncharacterized protein LOC105640179 [Jatropha curcas]

Gene co-expression network

sample Hb_031091_020 Hb_031091_020 Hb_002027_080 Hb_002027_080 Hb_031091_020--Hb_002027_080 Hb_000181_100 Hb_000181_100 Hb_031091_020--Hb_000181_100 Hb_000320_470 Hb_000320_470 Hb_031091_020--Hb_000320_470 Hb_001518_080 Hb_001518_080 Hb_031091_020--Hb_001518_080 Hb_003186_020 Hb_003186_020 Hb_031091_020--Hb_003186_020 Hb_000635_090 Hb_000635_090 Hb_031091_020--Hb_000635_090 Hb_002897_090 Hb_002897_090 Hb_002027_080--Hb_002897_090 Hb_002027_080--Hb_001518_080 Hb_003581_200 Hb_003581_200 Hb_002027_080--Hb_003581_200 Hb_000441_090 Hb_000441_090 Hb_002027_080--Hb_000441_090 Hb_000773_040 Hb_000773_040 Hb_002027_080--Hb_000773_040 Hb_002027_080--Hb_000635_090 Hb_000181_100--Hb_000320_470 Hb_004800_180 Hb_004800_180 Hb_000181_100--Hb_004800_180 Hb_001008_070 Hb_001008_070 Hb_000181_100--Hb_001008_070 Hb_005601_020 Hb_005601_020 Hb_000181_100--Hb_005601_020 Hb_026053_040 Hb_026053_040 Hb_000181_100--Hb_026053_040 Hb_000320_470--Hb_026053_040 Hb_001008_050 Hb_001008_050 Hb_000320_470--Hb_001008_050 Hb_000320_470--Hb_001008_070 Hb_089246_010 Hb_089246_010 Hb_000320_470--Hb_089246_010 Hb_001518_080--Hb_000635_090 Hb_000214_050 Hb_000214_050 Hb_001518_080--Hb_000214_050 Hb_079526_040 Hb_079526_040 Hb_001518_080--Hb_079526_040 Hb_002811_270 Hb_002811_270 Hb_001518_080--Hb_002811_270 Hb_015807_050 Hb_015807_050 Hb_001518_080--Hb_015807_050 Hb_000373_080 Hb_000373_080 Hb_003186_020--Hb_000373_080 Hb_000457_230 Hb_000457_230 Hb_003186_020--Hb_000457_230 Hb_000175_410 Hb_000175_410 Hb_003186_020--Hb_000175_410 Hb_031284_010 Hb_031284_010 Hb_003186_020--Hb_031284_010 Hb_003186_020--Hb_000214_050 Hb_000115_280 Hb_000115_280 Hb_003186_020--Hb_000115_280 Hb_000103_340 Hb_000103_340 Hb_000635_090--Hb_000103_340 Hb_006913_020 Hb_006913_020 Hb_000635_090--Hb_006913_020 Hb_000270_190 Hb_000270_190 Hb_000635_090--Hb_000270_190 Hb_000635_090--Hb_000773_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.31359 1.68621 2.78412 2.27219 1.38167 2.34628
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.2093 1.17944 1.17613 2.12306 3.36423

CAGE analysis