Hb_000046_500

Information

Type -
Description -
Location Contig46: 380613-386086
Sequence    

Annotation

kegg
ID rcu:RCOM_0680320
description tonneau, putative
nr
ID XP_012069384.1
description PREDICTED: probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 [Jatropha curcas]
swissprot
ID Q9FEE2
description Probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 OS=Arabidopsis thaliana GN=TON2 PE=1 SV=1
trembl
ID A0A067KV26
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02005 PE=4 SV=1
Gene Ontology
ID GO:0005634
description probable serine threonine-protein phosphatase 2a regulatory subunit b subunit ton2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43657: 380721-386041
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000046_500 0.0 - - PREDICTED: probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 [Jatropha curcas]
2 Hb_019181_040 0.0538397811 - - component of oligomeric golgi complex, putative [Ricinus communis]
3 Hb_007481_010 0.0611383221 - - PREDICTED: TBC1 domain family member 22B [Jatropha curcas]
4 Hb_000477_100 0.0639684649 - - PREDICTED: GDP-mannose transporter GONST4 [Jatropha curcas]
5 Hb_002989_020 0.0648056467 - - PREDICTED: uncharacterized protein LOC105630013 isoform X2 [Jatropha curcas]
6 Hb_079526_040 0.0667462267 - - Conserved oligomeric Golgi complex component, putative [Ricinus communis]
7 Hb_002071_070 0.0670089626 transcription factor TF Family: RB conserved hypothetical protein [Ricinus communis]
8 Hb_002728_080 0.0673348846 - - WD-repeat protein, putative [Ricinus communis]
9 Hb_000352_300 0.0687478836 - - PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Jatropha curcas]
10 Hb_000477_050 0.0688770174 - - PREDICTED: 26S protease regulatory subunit 8 homolog A [Jatropha curcas]
11 Hb_010515_020 0.0706008853 - - PREDICTED: protein transport protein SEC23-like [Jatropha curcas]
12 Hb_005650_010 0.0710095435 - - ATP binding protein, putative [Ricinus communis]
13 Hb_000317_040 0.0710106842 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
14 Hb_000322_080 0.0726126438 - - hypothetical protein JCGZ_07423 [Jatropha curcas]
15 Hb_000349_260 0.0729855426 - - PREDICTED: transmembrane protein 64 [Jatropha curcas]
16 Hb_001817_170 0.0730316748 - - PREDICTED: AP-1 complex subunit gamma-2-like [Jatropha curcas]
17 Hb_000703_190 0.0730508478 - - PREDICTED: serine/threonine-protein kinase EDR1 isoform X1 [Jatropha curcas]
18 Hb_000256_150 0.073741801 - - PREDICTED: trafficking protein particle complex II-specific subunit 120 homolog [Jatropha curcas]
19 Hb_003777_200 0.0738600854 - - PREDICTED: uncharacterized protein LOC105640933 [Jatropha curcas]
20 Hb_000778_010 0.0739275887 - - hypothetical protein [Bacillus subtilis]

Gene co-expression network

sample Hb_000046_500 Hb_000046_500 Hb_019181_040 Hb_019181_040 Hb_000046_500--Hb_019181_040 Hb_007481_010 Hb_007481_010 Hb_000046_500--Hb_007481_010 Hb_000477_100 Hb_000477_100 Hb_000046_500--Hb_000477_100 Hb_002989_020 Hb_002989_020 Hb_000046_500--Hb_002989_020 Hb_079526_040 Hb_079526_040 Hb_000046_500--Hb_079526_040 Hb_002071_070 Hb_002071_070 Hb_000046_500--Hb_002071_070 Hb_000349_260 Hb_000349_260 Hb_019181_040--Hb_000349_260 Hb_000317_040 Hb_000317_040 Hb_019181_040--Hb_000317_040 Hb_004754_050 Hb_004754_050 Hb_019181_040--Hb_004754_050 Hb_000703_190 Hb_000703_190 Hb_019181_040--Hb_000703_190 Hb_001269_330 Hb_001269_330 Hb_019181_040--Hb_001269_330 Hb_003528_030 Hb_003528_030 Hb_007481_010--Hb_003528_030 Hb_000352_300 Hb_000352_300 Hb_007481_010--Hb_000352_300 Hb_007481_010--Hb_001269_330 Hb_000256_150 Hb_000256_150 Hb_007481_010--Hb_000256_150 Hb_007481_010--Hb_000477_100 Hb_000477_100--Hb_000352_300 Hb_000146_040 Hb_000146_040 Hb_000477_100--Hb_000146_040 Hb_003097_140 Hb_003097_140 Hb_000477_100--Hb_003097_140 Hb_001051_070 Hb_001051_070 Hb_000477_100--Hb_001051_070 Hb_000340_530 Hb_000340_530 Hb_002989_020--Hb_000340_530 Hb_011063_050 Hb_011063_050 Hb_002989_020--Hb_011063_050 Hb_010142_020 Hb_010142_020 Hb_002989_020--Hb_010142_020 Hb_093458_040 Hb_093458_040 Hb_002989_020--Hb_093458_040 Hb_000477_050 Hb_000477_050 Hb_002989_020--Hb_000477_050 Hb_001679_050 Hb_001679_050 Hb_002989_020--Hb_001679_050 Hb_001518_080 Hb_001518_080 Hb_079526_040--Hb_001518_080 Hb_000078_140 Hb_000078_140 Hb_079526_040--Hb_000078_140 Hb_003581_200 Hb_003581_200 Hb_079526_040--Hb_003581_200 Hb_159809_070 Hb_159809_070 Hb_079526_040--Hb_159809_070 Hb_005650_010 Hb_005650_010 Hb_079526_040--Hb_005650_010 Hb_000856_040 Hb_000856_040 Hb_002071_070--Hb_000856_040 Hb_002042_050 Hb_002042_050 Hb_002071_070--Hb_002042_050 Hb_003058_260 Hb_003058_260 Hb_002071_070--Hb_003058_260 Hb_002890_130 Hb_002890_130 Hb_002071_070--Hb_002890_130 Hb_002830_010 Hb_002830_010 Hb_002071_070--Hb_002830_010 Hb_012632_010 Hb_012632_010 Hb_002071_070--Hb_012632_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
18.6411 21.6565 27.7216 42.3281 20.7623 18.722
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.3039 18.8269 27.0902 28.707 27.4036

CAGE analysis