Hb_004754_050

Information

Type -
Description -
Location Contig4754: 27667-31012
Sequence    

Annotation

kegg
ID egr:104433925
description hypothetical protein
nr
ID XP_010045137.1
description PREDICTED: uncharacterized protein LOC104433925 [Eucalyptus grandis]
swissprot
ID -
description -
trembl
ID A0A059DA41
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03785 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004754_050 0.0 - - PREDICTED: uncharacterized protein LOC104433925 [Eucalyptus grandis]
2 Hb_007975_060 0.0622178795 - - PREDICTED: uncharacterized GPI-anchored protein At1g61900 isoform X2 [Jatropha curcas]
3 Hb_002157_120 0.0637433619 - - conserved hypothetical protein [Ricinus communis]
4 Hb_019181_040 0.0717296252 - - component of oligomeric golgi complex, putative [Ricinus communis]
5 Hb_133702_010 0.0717365159 - - PREDICTED: reticulon-4-interacting protein 1, mitochondrial isoform X1 [Jatropha curcas]
6 Hb_001087_030 0.0727500452 - - PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit [Jatropha curcas]
7 Hb_000058_130 0.0744749696 - - PREDICTED: uncharacterized protein LOC105640884 [Jatropha curcas]
8 Hb_000028_520 0.0783275425 - - hypothetical protein L484_025125 [Morus notabilis]
9 Hb_000069_640 0.0792449076 - - PREDICTED: tubulin gamma-1 chain [Vitis vinifera]
10 Hb_000061_180 0.081027355 - - exonuclease, putative [Ricinus communis]
11 Hb_010931_130 0.0820204509 - - PREDICTED: mitogen-activated protein kinase 20 [Jatropha curcas]
12 Hb_005800_030 0.082182381 - - PREDICTED: lysM and putative peptidoglycan-binding domain-containing protein 4-like [Jatropha curcas]
13 Hb_000244_180 0.0843324372 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000080_130 0.0850357289 - - PREDICTED: TBC1 domain family member 22B [Jatropha curcas]
15 Hb_000256_150 0.0852221502 - - PREDICTED: trafficking protein particle complex II-specific subunit 120 homolog [Jatropha curcas]
16 Hb_013575_010 0.0864047329 - - Hepatocyte growth factor-regulated tyrosine kinase substrate, putative [Ricinus communis]
17 Hb_001512_040 0.0878809104 - - PREDICTED: probable methyltransferase PMT9 [Jatropha curcas]
18 Hb_001269_330 0.0880600238 - - PREDICTED: uncharacterized protein LOC105645377 [Jatropha curcas]
19 Hb_013405_020 0.0891267622 - - -
20 Hb_002572_020 0.0892231666 transcription factor TF Family: SBP hypothetical protein POPTR_0005s28010g [Populus trichocarpa]

Gene co-expression network

sample Hb_004754_050 Hb_004754_050 Hb_007975_060 Hb_007975_060 Hb_004754_050--Hb_007975_060 Hb_002157_120 Hb_002157_120 Hb_004754_050--Hb_002157_120 Hb_019181_040 Hb_019181_040 Hb_004754_050--Hb_019181_040 Hb_133702_010 Hb_133702_010 Hb_004754_050--Hb_133702_010 Hb_001087_030 Hb_001087_030 Hb_004754_050--Hb_001087_030 Hb_000058_130 Hb_000058_130 Hb_004754_050--Hb_000058_130 Hb_000061_180 Hb_000061_180 Hb_007975_060--Hb_000061_180 Hb_007975_060--Hb_002157_120 Hb_013405_020 Hb_013405_020 Hb_007975_060--Hb_013405_020 Hb_007975_060--Hb_133702_010 Hb_000023_260 Hb_000023_260 Hb_007975_060--Hb_000023_260 Hb_000028_520 Hb_000028_520 Hb_002157_120--Hb_000028_520 Hb_002157_120--Hb_000058_130 Hb_002157_120--Hb_000061_180 Hb_013575_010 Hb_013575_010 Hb_002157_120--Hb_013575_010 Hb_000046_500 Hb_000046_500 Hb_019181_040--Hb_000046_500 Hb_000349_260 Hb_000349_260 Hb_019181_040--Hb_000349_260 Hb_000317_040 Hb_000317_040 Hb_019181_040--Hb_000317_040 Hb_000703_190 Hb_000703_190 Hb_019181_040--Hb_000703_190 Hb_001269_330 Hb_001269_330 Hb_019181_040--Hb_001269_330 Hb_005800_030 Hb_005800_030 Hb_133702_010--Hb_005800_030 Hb_004452_120 Hb_004452_120 Hb_133702_010--Hb_004452_120 Hb_004545_110 Hb_004545_110 Hb_133702_010--Hb_004545_110 Hb_000721_030 Hb_000721_030 Hb_133702_010--Hb_000721_030 Hb_003878_090 Hb_003878_090 Hb_133702_010--Hb_003878_090 Hb_003929_170 Hb_003929_170 Hb_001087_030--Hb_003929_170 Hb_001087_030--Hb_001269_330 Hb_000139_530 Hb_000139_530 Hb_001087_030--Hb_000139_530 Hb_001087_030--Hb_000058_130 Hb_000049_020 Hb_000049_020 Hb_001087_030--Hb_000049_020 Hb_000579_120 Hb_000579_120 Hb_000058_130--Hb_000579_120 Hb_000207_150 Hb_000207_150 Hb_000058_130--Hb_000207_150 Hb_000058_130--Hb_000028_520 Hb_001232_190 Hb_001232_190 Hb_000058_130--Hb_001232_190 Hb_002874_180 Hb_002874_180 Hb_000058_130--Hb_002874_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.82988 4.68518 9.60973 12.3933 5.45952 4.67552
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.29095 6.67124 6.93898 4.32733 9.14744

CAGE analysis