Hb_000028_520

Information

Type -
Description -
Location Contig28: 549480-556286
Sequence    

Annotation

kegg
ID vvi:100243690
description uncharacterized LOC100243690
nr
ID XP_010099694.1
description hypothetical protein L484_025125 [Morus notabilis]
swissprot
ID -
description -
trembl
ID W9RIW8
description Uncharacterized protein OS=Morus notabilis GN=L484_025125 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000028_520 0.0 - - hypothetical protein L484_025125 [Morus notabilis]
2 Hb_002157_120 0.0596268084 - - conserved hypothetical protein [Ricinus communis]
3 Hb_018790_020 0.0674856613 - - protein kinase, putative [Ricinus communis]
4 Hb_000061_180 0.0718254204 - - exonuclease, putative [Ricinus communis]
5 Hb_001025_120 0.0722590011 transcription factor TF Family: Jumonji PREDICTED: jmjC domain-containing protein 4 [Jatropha curcas]
6 Hb_000058_130 0.0731205889 - - PREDICTED: uncharacterized protein LOC105640884 [Jatropha curcas]
7 Hb_003119_060 0.0743131191 - - PREDICTED: dicarboxylate transporter 2.1, chloroplastic [Jatropha curcas]
8 Hb_000260_460 0.0752578532 - - Ethanolamine-phosphate cytidylyltransferase, putative [Ricinus communis]
9 Hb_006132_090 0.0762631417 - - PREDICTED: origin of replication complex subunit 5 isoform X1 [Jatropha curcas]
10 Hb_002874_180 0.0767727553 - - PREDICTED: protein AIG2-like isoform X1 [Jatropha curcas]
11 Hb_002631_240 0.0781110294 - - JHL17M24.3 [Jatropha curcas]
12 Hb_004754_050 0.0783275425 - - PREDICTED: uncharacterized protein LOC104433925 [Eucalyptus grandis]
13 Hb_001703_040 0.0784783171 - - PREDICTED: uncharacterized protein At1g04910 isoform X2 [Jatropha curcas]
14 Hb_002572_020 0.0787495551 transcription factor TF Family: SBP hypothetical protein POPTR_0005s28010g [Populus trichocarpa]
15 Hb_001723_150 0.0792564796 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
16 Hb_010931_070 0.0798982033 - - PREDICTED: cleavage and polyadenylation specificity factor subunit 2 isoform X1 [Jatropha curcas]
17 Hb_003098_070 0.082044029 - - PREDICTED: uncharacterized protein LOC105633456 [Jatropha curcas]
18 Hb_000365_230 0.0825793169 - - PREDICTED: uncharacterized protein LOC105649056 [Jatropha curcas]
19 Hb_000703_190 0.0826065413 - - PREDICTED: serine/threonine-protein kinase EDR1 isoform X1 [Jatropha curcas]
20 Hb_007975_060 0.0830829764 - - PREDICTED: uncharacterized GPI-anchored protein At1g61900 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000028_520 Hb_000028_520 Hb_002157_120 Hb_002157_120 Hb_000028_520--Hb_002157_120 Hb_018790_020 Hb_018790_020 Hb_000028_520--Hb_018790_020 Hb_000061_180 Hb_000061_180 Hb_000028_520--Hb_000061_180 Hb_001025_120 Hb_001025_120 Hb_000028_520--Hb_001025_120 Hb_000058_130 Hb_000058_130 Hb_000028_520--Hb_000058_130 Hb_003119_060 Hb_003119_060 Hb_000028_520--Hb_003119_060 Hb_004754_050 Hb_004754_050 Hb_002157_120--Hb_004754_050 Hb_007975_060 Hb_007975_060 Hb_002157_120--Hb_007975_060 Hb_002157_120--Hb_000058_130 Hb_002157_120--Hb_000061_180 Hb_013575_010 Hb_013575_010 Hb_002157_120--Hb_013575_010 Hb_018790_020--Hb_001025_120 Hb_007894_150 Hb_007894_150 Hb_018790_020--Hb_007894_150 Hb_002716_060 Hb_002716_060 Hb_018790_020--Hb_002716_060 Hb_000365_230 Hb_000365_230 Hb_018790_020--Hb_000365_230 Hb_004109_320 Hb_004109_320 Hb_018790_020--Hb_004109_320 Hb_000375_390 Hb_000375_390 Hb_000061_180--Hb_000375_390 Hb_000023_260 Hb_000023_260 Hb_000061_180--Hb_000023_260 Hb_000061_180--Hb_007975_060 Hb_004452_120 Hb_004452_120 Hb_000061_180--Hb_004452_120 Hb_133702_010 Hb_133702_010 Hb_000061_180--Hb_133702_010 Hb_001025_120--Hb_002716_060 Hb_000676_070 Hb_000676_070 Hb_001025_120--Hb_000676_070 Hb_001025_120--Hb_007894_150 Hb_004807_020 Hb_004807_020 Hb_001025_120--Hb_004807_020 Hb_000579_120 Hb_000579_120 Hb_000058_130--Hb_000579_120 Hb_000207_150 Hb_000207_150 Hb_000058_130--Hb_000207_150 Hb_001232_190 Hb_001232_190 Hb_000058_130--Hb_001232_190 Hb_002874_180 Hb_002874_180 Hb_000058_130--Hb_002874_180 Hb_000890_130 Hb_000890_130 Hb_003119_060--Hb_000890_130 Hb_002687_120 Hb_002687_120 Hb_003119_060--Hb_002687_120 Hb_006132_090 Hb_006132_090 Hb_003119_060--Hb_006132_090 Hb_003119_060--Hb_002157_120 Hb_000774_020 Hb_000774_020 Hb_003119_060--Hb_000774_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.01515 6.53731 16.8474 11.9783 6.86524 6.54882
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.24801 8.27763 8.48694 6.4023 10.4077

CAGE analysis