Hb_000365_230

Information

Type -
Description -
Location Contig365: 202586-206322
Sequence    

Annotation

kegg
ID rcu:RCOM_1323040
description hypothetical protein
nr
ID XP_012090973.1
description PREDICTED: uncharacterized protein LOC105649056 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JGB8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00610 PE=4 SV=1
Gene Ontology
ID GO:0005739
description af428345_1 at3g54190 f24b22_150

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37578: 202386-220229 , PASA_asmbl_37579: 202378-203214
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000365_230 0.0 - - PREDICTED: uncharacterized protein LOC105649056 [Jatropha curcas]
2 Hb_164390_010 0.0498340421 transcription factor TF Family: bZIP PREDICTED: transcription factor HBP-1a [Jatropha curcas]
3 Hb_004109_320 0.0501517845 - - PREDICTED: vacuolar protein sorting-associated protein 52 A [Jatropha curcas]
4 Hb_007894_150 0.0539807379 - - hypothetical protein EUGRSUZ_F03462 [Eucalyptus grandis]
5 Hb_003098_070 0.0561294186 - - PREDICTED: uncharacterized protein LOC105633456 [Jatropha curcas]
6 Hb_062226_130 0.0570972258 - - PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4 [Jatropha curcas]
7 Hb_000778_010 0.0581492828 - - hypothetical protein [Bacillus subtilis]
8 Hb_003861_060 0.0602412291 - - PREDICTED: treacle protein [Jatropha curcas]
9 Hb_002849_130 0.0606906014 - - PREDICTED: RAB6A-GEF complex partner protein 1-like [Jatropha curcas]
10 Hb_183433_010 0.0611106205 - - PREDICTED: FAD synthase isoform X3 [Jatropha curcas]
11 Hb_163175_010 0.061884671 - - hypothetical protein CISIN_1g036035mg, partial [Citrus sinensis]
12 Hb_003428_010 0.062173657 - - PREDICTED: probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 [Jatropha curcas]
13 Hb_007248_030 0.0628360399 - - PREDICTED: uncharacterized protein LOC105633558 [Jatropha curcas]
14 Hb_171900_090 0.0644974255 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001481_060 0.0662893199 - - PREDICTED: E3 ubiquitin-protein ligase HOS1 isoform X1 [Jatropha curcas]
16 Hb_002014_010 0.0666238059 - - Uncharacterized protein isoform 1 [Theobroma cacao]
17 Hb_000392_420 0.066866766 - - PREDICTED: probable aldehyde dehydrogenase isoform X1 [Jatropha curcas]
18 Hb_018790_020 0.070754955 - - protein kinase, putative [Ricinus communis]
19 Hb_000292_100 0.0712593213 transcription factor TF Family: bZIP PREDICTED: transcription factor HBP-1a [Jatropha curcas]
20 Hb_000699_150 0.0713998904 - - PREDICTED: AT-hook motif nuclear-localized protein 14 [Jatropha curcas]

Gene co-expression network

sample Hb_000365_230 Hb_000365_230 Hb_164390_010 Hb_164390_010 Hb_000365_230--Hb_164390_010 Hb_004109_320 Hb_004109_320 Hb_000365_230--Hb_004109_320 Hb_007894_150 Hb_007894_150 Hb_000365_230--Hb_007894_150 Hb_003098_070 Hb_003098_070 Hb_000365_230--Hb_003098_070 Hb_062226_130 Hb_062226_130 Hb_000365_230--Hb_062226_130 Hb_000778_010 Hb_000778_010 Hb_000365_230--Hb_000778_010 Hb_164390_010--Hb_007894_150 Hb_163175_010 Hb_163175_010 Hb_164390_010--Hb_163175_010 Hb_002400_340 Hb_002400_340 Hb_164390_010--Hb_002400_340 Hb_164390_010--Hb_004109_320 Hb_171900_090 Hb_171900_090 Hb_164390_010--Hb_171900_090 Hb_004109_320--Hb_007894_150 Hb_002014_010 Hb_002014_010 Hb_004109_320--Hb_002014_010 Hb_002849_130 Hb_002849_130 Hb_004109_320--Hb_002849_130 Hb_000477_050 Hb_000477_050 Hb_004109_320--Hb_000477_050 Hb_006189_020 Hb_006189_020 Hb_007894_150--Hb_006189_020 Hb_005000_170 Hb_005000_170 Hb_007894_150--Hb_005000_170 Hb_001226_150 Hb_001226_150 Hb_007894_150--Hb_001226_150 Hb_000139_080 Hb_000139_080 Hb_003098_070--Hb_000139_080 Hb_003098_070--Hb_006189_020 Hb_033312_040 Hb_033312_040 Hb_003098_070--Hb_033312_040 Hb_000476_060 Hb_000476_060 Hb_003098_070--Hb_000476_060 Hb_000078_140 Hb_000078_140 Hb_003098_070--Hb_000078_140 Hb_000738_020 Hb_000738_020 Hb_062226_130--Hb_000738_020 Hb_005162_090 Hb_005162_090 Hb_062226_130--Hb_005162_090 Hb_164010_040 Hb_164010_040 Hb_062226_130--Hb_164010_040 Hb_003849_110 Hb_003849_110 Hb_062226_130--Hb_003849_110 Hb_003428_010 Hb_003428_010 Hb_062226_130--Hb_003428_010 Hb_000392_420 Hb_000392_420 Hb_000778_010--Hb_000392_420 Hb_000663_060 Hb_000663_060 Hb_000778_010--Hb_000663_060 Hb_000778_010--Hb_164390_010 Hb_007472_070 Hb_007472_070 Hb_000778_010--Hb_007472_070 Hb_000173_280 Hb_000173_280 Hb_000778_010--Hb_000173_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.3686 17.5464 23.6705 21.1729 11.4352 13.2266
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.1023 18.4025 14.3925 16.2824 17.7432

CAGE analysis