Hb_006132_090

Information

Type -
Description -
Location Contig6132: 67188-69961
Sequence    

Annotation

kegg
ID pop:POPTR_0014s08170g
description POPTRDRAFT_900024; hypothetical protein
nr
ID XP_012083368.1
description PREDICTED: origin of replication complex subunit 5 isoform X1 [Jatropha curcas]
swissprot
ID Q6EWX0
description Origin of replication complex subunit 5 OS=Arabidopsis thaliana GN=ORC5 PE=1 SV=1
trembl
ID A0A067K0L8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14384 PE=4 SV=1
Gene Ontology
ID GO:0000808
description origin recognition complex subunit 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006132_090 0.0 - - PREDICTED: origin of replication complex subunit 5 isoform X1 [Jatropha curcas]
2 Hb_005167_010 0.0604952886 - - PREDICTED: serine/threonine-protein kinase At5g01020 isoform X1 [Jatropha curcas]
3 Hb_001900_140 0.0717889344 - - PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Jatropha curcas]
4 Hb_003878_090 0.0725699061 - - PREDICTED: polynucleotide 3'-phosphatase ZDP [Jatropha curcas]
5 Hb_002157_120 0.0728053101 - - conserved hypothetical protein [Ricinus communis]
6 Hb_007002_020 0.0745224427 - - PREDICTED: uncharacterized protein LOC105642604 [Jatropha curcas]
7 Hb_003119_060 0.0755853903 - - PREDICTED: dicarboxylate transporter 2.1, chloroplastic [Jatropha curcas]
8 Hb_000028_520 0.0762631417 - - hypothetical protein L484_025125 [Morus notabilis]
9 Hb_007975_060 0.0769690574 - - PREDICTED: uncharacterized GPI-anchored protein At1g61900 isoform X2 [Jatropha curcas]
10 Hb_004965_110 0.0775727176 - - PREDICTED: folylpolyglutamate synthase [Jatropha curcas]
11 Hb_000080_130 0.0779388875 - - PREDICTED: TBC1 domain family member 22B [Jatropha curcas]
12 Hb_002304_150 0.078248694 - - PREDICTED: protein IQ-DOMAIN 1-like isoform X1 [Jatropha curcas]
13 Hb_001863_380 0.0796987755 - - PREDICTED: 14-3-3 protein 7 [Jatropha curcas]
14 Hb_009296_070 0.0799850936 - - PREDICTED: cyclin-dependent kinase D-3 isoform X1 [Jatropha curcas]
15 Hb_001287_040 0.0822592627 - - PREDICTED: kinesin-like protein NACK1 [Jatropha curcas]
16 Hb_003266_030 0.0838834543 - - hypothetical protein POPTR_0002s05550g [Populus trichocarpa]
17 Hb_003124_150 0.0844289728 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 28-like [Jatropha curcas]
18 Hb_133702_010 0.0858721636 - - PREDICTED: reticulon-4-interacting protein 1, mitochondrial isoform X1 [Jatropha curcas]
19 Hb_013405_020 0.085963765 - - -
20 Hb_003861_060 0.0867880629 - - PREDICTED: treacle protein [Jatropha curcas]

Gene co-expression network

sample Hb_006132_090 Hb_006132_090 Hb_005167_010 Hb_005167_010 Hb_006132_090--Hb_005167_010 Hb_001900_140 Hb_001900_140 Hb_006132_090--Hb_001900_140 Hb_003878_090 Hb_003878_090 Hb_006132_090--Hb_003878_090 Hb_002157_120 Hb_002157_120 Hb_006132_090--Hb_002157_120 Hb_007002_020 Hb_007002_020 Hb_006132_090--Hb_007002_020 Hb_003119_060 Hb_003119_060 Hb_006132_090--Hb_003119_060 Hb_001195_060 Hb_001195_060 Hb_005167_010--Hb_001195_060 Hb_012799_170 Hb_012799_170 Hb_005167_010--Hb_012799_170 Hb_000080_130 Hb_000080_130 Hb_005167_010--Hb_000080_130 Hb_004545_110 Hb_004545_110 Hb_005167_010--Hb_004545_110 Hb_007975_060 Hb_007975_060 Hb_005167_010--Hb_007975_060 Hb_001587_180 Hb_001587_180 Hb_001900_140--Hb_001587_180 Hb_007558_090 Hb_007558_090 Hb_001900_140--Hb_007558_090 Hb_003266_030 Hb_003266_030 Hb_001900_140--Hb_003266_030 Hb_007904_230 Hb_007904_230 Hb_001900_140--Hb_007904_230 Hb_005946_040 Hb_005946_040 Hb_001900_140--Hb_005946_040 Hb_000976_120 Hb_000976_120 Hb_003878_090--Hb_000976_120 Hb_003861_060 Hb_003861_060 Hb_003878_090--Hb_003861_060 Hb_000069_720 Hb_000069_720 Hb_003878_090--Hb_000069_720 Hb_014834_150 Hb_014834_150 Hb_003878_090--Hb_014834_150 Hb_000840_200 Hb_000840_200 Hb_003878_090--Hb_000840_200 Hb_133702_010 Hb_133702_010 Hb_003878_090--Hb_133702_010 Hb_000028_520 Hb_000028_520 Hb_002157_120--Hb_000028_520 Hb_004754_050 Hb_004754_050 Hb_002157_120--Hb_004754_050 Hb_002157_120--Hb_007975_060 Hb_000058_130 Hb_000058_130 Hb_002157_120--Hb_000058_130 Hb_000061_180 Hb_000061_180 Hb_002157_120--Hb_000061_180 Hb_013575_010 Hb_013575_010 Hb_002157_120--Hb_013575_010 Hb_001287_040 Hb_001287_040 Hb_007002_020--Hb_001287_040 Hb_007002_020--Hb_001900_140 Hb_000003_780 Hb_000003_780 Hb_007002_020--Hb_000003_780 Hb_000811_070 Hb_000811_070 Hb_007002_020--Hb_000811_070 Hb_007002_020--Hb_007975_060 Hb_000890_130 Hb_000890_130 Hb_003119_060--Hb_000890_130 Hb_002687_120 Hb_002687_120 Hb_003119_060--Hb_002687_120 Hb_003119_060--Hb_000028_520 Hb_003119_060--Hb_002157_120 Hb_000774_020 Hb_000774_020 Hb_003119_060--Hb_000774_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.53215 2.15812 5.63037 3.99919 1.63308 2.21376
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.36231 4.0853 3.65048 2.24849 4.18225

CAGE analysis