Hb_152202_010

Information

Type -
Description -
Location Contig152202: 10685-11671
Sequence    

Annotation

kegg
ID rcu:RCOM_1327270
description Inositol-tetrakisphosphate 1-kinase, putative (EC:2.7.1.134)
nr
ID XP_012070232.1
description PREDICTED: inositol-tetrakisphosphate 1-kinase 1 [Jatropha curcas]
swissprot
ID Q9SBA5
description Inositol-tetrakisphosphate 1-kinase 1 OS=Arabidopsis thaliana GN=ITPK1 PE=1 SV=1
trembl
ID A0A067KX02
description Inositol-tetrakisphosphate 1-kinase OS=Jatropha curcas GN=JCGZ_02548 PE=3 SV=1
Gene Ontology
ID GO:0005622
description inositol-tetrakisphosphate 1-kinase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_152202_010 0.0 - - PREDICTED: inositol-tetrakisphosphate 1-kinase 1 [Jatropha curcas]
2 Hb_007919_100 0.066949718 transcription factor TF Family: SET PREDICTED: uncharacterized protein LOC105635137 [Jatropha curcas]
3 Hb_012194_050 0.0672305593 - - Aspartyl aminopeptidase, putative [Ricinus communis]
4 Hb_032050_040 0.0673590128 - - PREDICTED: protein S-acyltransferase 8-like [Jatropha curcas]
5 Hb_000362_150 0.0795660451 - - PREDICTED: homogentisate 1,2-dioxygenase [Jatropha curcas]
6 Hb_001640_030 0.0814769034 - - PREDICTED: uncharacterized protein LOC105630021 [Jatropha curcas]
7 Hb_001898_210 0.0852260773 - - PREDICTED: shaggy-related protein kinase kappa [Populus euphratica]
8 Hb_005078_010 0.0889942289 - - Derlin-2, putative [Ricinus communis]
9 Hb_000300_050 0.0897490542 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002947_030 0.0897494595 - - PREDICTED: uncharacterized protein LOC105633529 [Jatropha curcas]
11 Hb_000705_120 0.090104377 - - glycosyltransferase, putative [Ricinus communis]
12 Hb_006909_070 0.0913324293 - - ABC transporter family protein [Hevea brasiliensis]
13 Hb_009529_030 0.0935501911 - - PREDICTED: transmembrane protein 120 homolog [Jatropha curcas]
14 Hb_172632_040 0.0937700973 - - PREDICTED: pyrophosphate-energized membrane proton pump 2 isoform X1 [Amborella trichopoda]
15 Hb_002785_050 0.0951779643 - - PREDICTED: adenylosuccinate lyase-like [Jatropha curcas]
16 Hb_000830_030 0.0961604195 - - PREDICTED: uncharacterized protein LOC105644214 [Jatropha curcas]
17 Hb_000718_080 0.0964802449 - - hypothetical protein PRUPE_ppa005259mg [Prunus persica]
18 Hb_004531_140 0.0967261243 - - PREDICTED: uncharacterized protein LOC105635023 [Jatropha curcas]
19 Hb_011486_040 0.0975684764 - - PREDICTED: protein trichome birefringence-like 13 [Jatropha curcas]
20 Hb_000107_210 0.097887296 - - PREDICTED: ankyrin repeat domain-containing protein 2 [Jatropha curcas]

Gene co-expression network

sample Hb_152202_010 Hb_152202_010 Hb_007919_100 Hb_007919_100 Hb_152202_010--Hb_007919_100 Hb_012194_050 Hb_012194_050 Hb_152202_010--Hb_012194_050 Hb_032050_040 Hb_032050_040 Hb_152202_010--Hb_032050_040 Hb_000362_150 Hb_000362_150 Hb_152202_010--Hb_000362_150 Hb_001640_030 Hb_001640_030 Hb_152202_010--Hb_001640_030 Hb_001898_210 Hb_001898_210 Hb_152202_010--Hb_001898_210 Hb_007919_100--Hb_032050_040 Hb_002947_030 Hb_002947_030 Hb_007919_100--Hb_002947_030 Hb_006909_070 Hb_006909_070 Hb_007919_100--Hb_006909_070 Hb_002273_120 Hb_002273_120 Hb_007919_100--Hb_002273_120 Hb_000300_050 Hb_000300_050 Hb_007919_100--Hb_000300_050 Hb_001416_070 Hb_001416_070 Hb_012194_050--Hb_001416_070 Hb_005078_010 Hb_005078_010 Hb_012194_050--Hb_005078_010 Hb_003010_020 Hb_003010_020 Hb_012194_050--Hb_003010_020 Hb_012194_050--Hb_000362_150 Hb_012194_050--Hb_032050_040 Hb_032050_040--Hb_003010_020 Hb_032050_040--Hb_002273_120 Hb_002785_050 Hb_002785_050 Hb_032050_040--Hb_002785_050 Hb_000127_040 Hb_000127_040 Hb_032050_040--Hb_000127_040 Hb_009529_030 Hb_009529_030 Hb_000362_150--Hb_009529_030 Hb_001496_070 Hb_001496_070 Hb_000362_150--Hb_001496_070 Hb_000004_030 Hb_000004_030 Hb_000362_150--Hb_000004_030 Hb_000362_150--Hb_032050_040 Hb_002493_020 Hb_002493_020 Hb_000362_150--Hb_002493_020 Hb_002631_070 Hb_002631_070 Hb_001640_030--Hb_002631_070 Hb_003994_280 Hb_003994_280 Hb_001640_030--Hb_003994_280 Hb_001640_030--Hb_000362_150 Hb_004680_120 Hb_004680_120 Hb_001640_030--Hb_004680_120 Hb_000050_190 Hb_000050_190 Hb_001640_030--Hb_000050_190 Hb_172632_040 Hb_172632_040 Hb_001898_210--Hb_172632_040 Hb_009328_020 Hb_009328_020 Hb_001898_210--Hb_009328_020 Hb_000479_250 Hb_000479_250 Hb_001898_210--Hb_000479_250 Hb_001279_030 Hb_001279_030 Hb_001898_210--Hb_001279_030 Hb_000022_020 Hb_000022_020 Hb_001898_210--Hb_000022_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.6273 5.39967 6.50266 14.5828 12.3519 18.1245
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.6537 8.26446 8.71686 6.87732 15.0694

CAGE analysis