Hb_032050_040

Information

Type -
Description -
Location Contig32050: 12171-19577
Sequence    

Annotation

kegg
ID rcu:RCOM_0960640
description zinc finger protein, putative (EC:1.3.1.74)
nr
ID XP_012073953.1
description PREDICTED: protein S-acyltransferase 8-like [Jatropha curcas]
swissprot
ID Q9SB58
description Protein S-acyltransferase 8 OS=Arabidopsis thaliana GN=PAT08 PE=1 SV=2
trembl
ID A0A067KKB2
description S-acyltransferase OS=Jatropha curcas GN=JCGZ_08344 PE=3 SV=1
Gene Ontology
ID GO:0016021
description protein s-acyltransferase 8-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33856: 12324-19275
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032050_040 0.0 - - PREDICTED: protein S-acyltransferase 8-like [Jatropha curcas]
2 Hb_007919_100 0.0607994599 transcription factor TF Family: SET PREDICTED: uncharacterized protein LOC105635137 [Jatropha curcas]
3 Hb_003010_020 0.0659797841 - - PREDICTED: probable inactive heme oxygenase 2, chloroplastic isoform X1 [Jatropha curcas]
4 Hb_152202_010 0.0673590128 - - PREDICTED: inositol-tetrakisphosphate 1-kinase 1 [Jatropha curcas]
5 Hb_002273_120 0.0676375633 - - PREDICTED: probable apyrase 6 [Jatropha curcas]
6 Hb_002785_050 0.0685669278 - - PREDICTED: adenylosuccinate lyase-like [Jatropha curcas]
7 Hb_000127_040 0.0690079571 - - PREDICTED: protein S-acyltransferase 8-like [Jatropha curcas]
8 Hb_002716_130 0.0692200006 - - PREDICTED: uncharacterized protein LOC105645470 isoform X2 [Jatropha curcas]
9 Hb_009529_030 0.0715061485 - - PREDICTED: transmembrane protein 120 homolog [Jatropha curcas]
10 Hb_000830_030 0.0741745497 - - PREDICTED: uncharacterized protein LOC105644214 [Jatropha curcas]
11 Hb_001018_130 0.0746001157 - - PREDICTED: uncharacterized protein LOC105638260 [Jatropha curcas]
12 Hb_033642_030 0.0766297982 - - PREDICTED: G-protein coupled receptor 1 isoform X1 [Jatropha curcas]
13 Hb_054865_150 0.0781752627 - - PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Jatropha curcas]
14 Hb_001135_060 0.0789564873 - - PREDICTED: probable protein phosphatase 2C 38 [Jatropha curcas]
15 Hb_000212_240 0.0828176222 - - short-chain dehydrogenase, putative [Ricinus communis]
16 Hb_000362_150 0.0832786767 - - PREDICTED: homogentisate 1,2-dioxygenase [Jatropha curcas]
17 Hb_002947_030 0.083386639 - - PREDICTED: uncharacterized protein LOC105633529 [Jatropha curcas]
18 Hb_001948_130 0.0859021238 - - PREDICTED: uncharacterized protein LOC105638579 [Jatropha curcas]
19 Hb_000789_310 0.0864753799 - - PREDICTED: E3 ubiquitin-protein ligase PRT1 [Jatropha curcas]
20 Hb_001882_050 0.0865421571 - - hydroxysteroid dehydrogenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_032050_040 Hb_032050_040 Hb_007919_100 Hb_007919_100 Hb_032050_040--Hb_007919_100 Hb_003010_020 Hb_003010_020 Hb_032050_040--Hb_003010_020 Hb_152202_010 Hb_152202_010 Hb_032050_040--Hb_152202_010 Hb_002273_120 Hb_002273_120 Hb_032050_040--Hb_002273_120 Hb_002785_050 Hb_002785_050 Hb_032050_040--Hb_002785_050 Hb_000127_040 Hb_000127_040 Hb_032050_040--Hb_000127_040 Hb_007919_100--Hb_152202_010 Hb_002947_030 Hb_002947_030 Hb_007919_100--Hb_002947_030 Hb_006909_070 Hb_006909_070 Hb_007919_100--Hb_006909_070 Hb_007919_100--Hb_002273_120 Hb_000300_050 Hb_000300_050 Hb_007919_100--Hb_000300_050 Hb_001416_070 Hb_001416_070 Hb_003010_020--Hb_001416_070 Hb_003010_020--Hb_002273_120 Hb_003438_050 Hb_003438_050 Hb_003010_020--Hb_003438_050 Hb_012194_050 Hb_012194_050 Hb_003010_020--Hb_012194_050 Hb_003010_020--Hb_006909_070 Hb_152202_010--Hb_012194_050 Hb_000362_150 Hb_000362_150 Hb_152202_010--Hb_000362_150 Hb_001640_030 Hb_001640_030 Hb_152202_010--Hb_001640_030 Hb_001898_210 Hb_001898_210 Hb_152202_010--Hb_001898_210 Hb_009529_030 Hb_009529_030 Hb_002273_120--Hb_009529_030 Hb_002273_120--Hb_002785_050 Hb_003375_070 Hb_003375_070 Hb_002273_120--Hb_003375_070 Hb_017295_010 Hb_017295_010 Hb_002273_120--Hb_017295_010 Hb_002785_050--Hb_009529_030 Hb_000830_030 Hb_000830_030 Hb_002785_050--Hb_000830_030 Hb_001882_050 Hb_001882_050 Hb_002785_050--Hb_001882_050 Hb_000260_330 Hb_000260_330 Hb_002785_050--Hb_000260_330 Hb_002213_070 Hb_002213_070 Hb_000127_040--Hb_002213_070 Hb_004935_030 Hb_004935_030 Hb_000127_040--Hb_004935_030 Hb_007803_050 Hb_007803_050 Hb_000127_040--Hb_007803_050 Hb_000457_260 Hb_000457_260 Hb_000127_040--Hb_000457_260 Hb_054865_150 Hb_054865_150 Hb_000127_040--Hb_054865_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.6411 9.42038 9.77231 17.5942 16.3108 24.43
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.2937 9.78328 11.045 11.3143 13.9778

CAGE analysis