Hb_000836_290

Information

Type -
Description -
Location Contig836: 213756-217167
Sequence    

Annotation

kegg
ID rcu:RCOM_1616320
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.11.25)
nr
ID XP_002511906.1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
swissprot
ID Q3EDL4
description Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2
trembl
ID B9RDW7
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative OS=Ricinus communis GN=RCOM_1616320 PE=3 SV=1
Gene Ontology
ID GO:0005622
description probable serine threonine-protein kinase at1g01540

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59940: 213626-213958 , PASA_asmbl_59941: 214063-217187 , PASA_asmbl_59942: 217906-227405
cDNA
(Sanger)
(ID:Location)		 002_A20.ab1: 216472-217187

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000836_290 0.0 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
2 Hb_004631_150 0.0856531796 - - PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Jatropha curcas]
3 Hb_001512_040 0.0913395083 - - PREDICTED: probable methyltransferase PMT9 [Jatropha curcas]
4 Hb_000261_050 0.097069507 - - PREDICTED: probable magnesium transporter NIPA2 [Populus euphratica]
5 Hb_171334_010 0.0976684091 - - PREDICTED: CDPK-related kinase 5 [Jatropha curcas]
6 Hb_000347_040 0.1012643888 - - hypothetical protein JCGZ_24660 [Jatropha curcas]
7 Hb_032202_220 0.1024674351 - - ring finger protein, putative [Ricinus communis]
8 Hb_000136_140 0.1037750694 - - PREDICTED: uncharacterized protein LOC105648960 [Jatropha curcas]
9 Hb_001301_270 0.1061940495 - - PREDICTED: heat shock 70 kDa protein 16 [Jatropha curcas]
10 Hb_001876_040 0.1089775638 - - PREDICTED: mucin-5B [Jatropha curcas]
11 Hb_000388_150 0.1166713373 - - hypothetical protein JCGZ_21651 [Jatropha curcas]
12 Hb_000058_110 0.1173030844 - - PREDICTED: putative BPI/LBP family protein At1g04970 isoform X1 [Jatropha curcas]
13 Hb_000365_100 0.1185744491 - - PREDICTED: probable galacturonosyltransferase 7 isoform X1 [Jatropha curcas]
14 Hb_001014_100 0.1230338049 - - PREDICTED: protein MEI2-like 4 [Jatropha curcas]
15 Hb_000958_070 0.1230940964 - - hypothetical protein PRUPE_ppa007681mg [Prunus persica]
16 Hb_162275_040 0.1231732573 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001157_230 0.123219869 - - Protein AFR, putative [Ricinus communis]
18 Hb_022250_010 0.1237969211 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Jatropha curcas]
19 Hb_000101_080 0.1241324284 - - PREDICTED: protein CREG1 [Jatropha curcas]
20 Hb_010172_010 0.1242596475 - - PREDICTED: probable beta-1,3-galactosyltransferase 20 [Jatropha curcas]

Gene co-expression network

sample Hb_000836_290 Hb_000836_290 Hb_004631_150 Hb_004631_150 Hb_000836_290--Hb_004631_150 Hb_001512_040 Hb_001512_040 Hb_000836_290--Hb_001512_040 Hb_000261_050 Hb_000261_050 Hb_000836_290--Hb_000261_050 Hb_171334_010 Hb_171334_010 Hb_000836_290--Hb_171334_010 Hb_000347_040 Hb_000347_040 Hb_000836_290--Hb_000347_040 Hb_032202_220 Hb_032202_220 Hb_000836_290--Hb_032202_220 Hb_000958_070 Hb_000958_070 Hb_004631_150--Hb_000958_070 Hb_003747_120 Hb_003747_120 Hb_004631_150--Hb_003747_120 Hb_002014_040 Hb_002014_040 Hb_004631_150--Hb_002014_040 Hb_000362_170 Hb_000362_170 Hb_004631_150--Hb_000362_170 Hb_001244_150 Hb_001244_150 Hb_004631_150--Hb_001244_150 Hb_000101_080 Hb_000101_080 Hb_001512_040--Hb_000101_080 Hb_001512_040--Hb_032202_220 Hb_019181_040 Hb_019181_040 Hb_001512_040--Hb_019181_040 Hb_004754_050 Hb_004754_050 Hb_001512_040--Hb_004754_050 Hb_002326_040 Hb_002326_040 Hb_001512_040--Hb_002326_040 Hb_001014_100 Hb_001014_100 Hb_000261_050--Hb_001014_100 Hb_000261_050--Hb_032202_220 Hb_000193_330 Hb_000193_330 Hb_000261_050--Hb_000193_330 Hb_005496_050 Hb_005496_050 Hb_000261_050--Hb_005496_050 Hb_001876_040 Hb_001876_040 Hb_000261_050--Hb_001876_040 Hb_002027_080 Hb_002027_080 Hb_000261_050--Hb_002027_080 Hb_000071_150 Hb_000071_150 Hb_171334_010--Hb_000071_150 Hb_002539_110 Hb_002539_110 Hb_171334_010--Hb_002539_110 Hb_005895_010 Hb_005895_010 Hb_171334_010--Hb_005895_010 Hb_162275_040 Hb_162275_040 Hb_171334_010--Hb_162275_040 Hb_171334_010--Hb_000362_170 Hb_013726_080 Hb_013726_080 Hb_171334_010--Hb_013726_080 Hb_004096_240 Hb_004096_240 Hb_000347_040--Hb_004096_240 Hb_000365_100 Hb_000365_100 Hb_000347_040--Hb_000365_100 Hb_000120_210 Hb_000120_210 Hb_000347_040--Hb_000120_210 Hb_000347_040--Hb_005895_010 Hb_069662_010 Hb_069662_010 Hb_000347_040--Hb_069662_010 Hb_000347_040--Hb_001876_040 Hb_001301_270 Hb_001301_270 Hb_032202_220--Hb_001301_270 Hb_000078_140 Hb_000078_140 Hb_032202_220--Hb_000078_140 Hb_032202_220--Hb_001876_040 Hb_002774_190 Hb_002774_190 Hb_032202_220--Hb_002774_190 Hb_001157_230 Hb_001157_230 Hb_032202_220--Hb_001157_230 Hb_000061_180 Hb_000061_180 Hb_032202_220--Hb_000061_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.6758 11.2177 19.8708 22.8109 19.6249 13.9445
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.42499 7.37035 13.1648 6.46591 28.0102

CAGE analysis