Hb_002183_080

Information

Type -
Description -
Location Contig2183: 99183-100011
Sequence    

Annotation

kegg
ID rcu:RCOM_0097640
description catalytic, putative
nr
ID XP_002533454.1
description catalytic, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T5D5
description Catalytic, putative OS=Ricinus communis GN=RCOM_0097640 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002183_080 0.0 - - catalytic, putative [Ricinus communis]
2 Hb_069338_010 0.2173244821 - - conserved hypothetical protein [Ricinus communis]
3 Hb_030627_010 0.2194163365 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 [Sesamum indicum]
4 Hb_000679_030 0.2257472256 transcription factor TF Family: bZIP PREDICTED: transcription factor HY5 [Jatropha curcas]
5 Hb_000946_060 0.2268019988 - - PREDICTED: chaperone protein dnaJ 20, chloroplastic-like isoform X2 [Jatropha curcas]
6 Hb_003683_070 0.2291189942 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
7 Hb_001205_040 0.236436437 - - unnamed protein product [Vitis vinifera]
8 Hb_000184_010 0.2447725283 - - mutt domain protein, putative [Ricinus communis]
9 Hb_002716_110 0.2486111915 - - PREDICTED: interaptin [Jatropha curcas]
10 Hb_000005_140 0.2534806952 transcription factor TF Family: C2H2 unknown [Populus trichocarpa]
11 Hb_164945_020 0.2628457762 - - PREDICTED: protein IQ-DOMAIN 14 [Jatropha curcas]
12 Hb_012239_050 0.2633147718 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000329_500 0.2714492166 - - PREDICTED: uncharacterized protein LOC105643180 isoform X1 [Jatropha curcas]
14 Hb_002592_020 0.2718234286 - - PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform X1 [Jatropha curcas]
15 Hb_002681_210 0.2724938241 - - PREDICTED: uncharacterized protein LOC105633686 [Jatropha curcas]
16 Hb_000193_180 0.2765313361 transcription factor TF Family: MYB PREDICTED: transcription factor MYB28-like [Jatropha curcas]
17 Hb_000579_110 0.2768144808 - - PREDICTED: transmembrane protein 136 [Jatropha curcas]
18 Hb_056196_010 0.278759094 - - PREDICTED: uncharacterized protein LOC105108358 [Populus euphratica]
19 Hb_003018_150 0.2788935366 - - PREDICTED: uncharacterized protein LOC105628869 [Jatropha curcas]
20 Hb_005914_160 0.2808898411 - - PREDICTED: protein PROTON GRADIENT REGULATION 5, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_002183_080 Hb_002183_080 Hb_069338_010 Hb_069338_010 Hb_002183_080--Hb_069338_010 Hb_030627_010 Hb_030627_010 Hb_002183_080--Hb_030627_010 Hb_000679_030 Hb_000679_030 Hb_002183_080--Hb_000679_030 Hb_000946_060 Hb_000946_060 Hb_002183_080--Hb_000946_060 Hb_003683_070 Hb_003683_070 Hb_002183_080--Hb_003683_070 Hb_001205_040 Hb_001205_040 Hb_002183_080--Hb_001205_040 Hb_053272_010 Hb_053272_010 Hb_069338_010--Hb_053272_010 Hb_000005_140 Hb_000005_140 Hb_069338_010--Hb_000005_140 Hb_009662_070 Hb_009662_070 Hb_069338_010--Hb_009662_070 Hb_000099_140 Hb_000099_140 Hb_069338_010--Hb_000099_140 Hb_002968_050 Hb_002968_050 Hb_069338_010--Hb_002968_050 Hb_000062_210 Hb_000062_210 Hb_030627_010--Hb_000062_210 Hb_000128_030 Hb_000128_030 Hb_030627_010--Hb_000128_030 Hb_000796_130 Hb_000796_130 Hb_030627_010--Hb_000796_130 Hb_003540_100 Hb_003540_100 Hb_030627_010--Hb_003540_100 Hb_007558_130 Hb_007558_130 Hb_030627_010--Hb_007558_130 Hb_002716_110 Hb_002716_110 Hb_000679_030--Hb_002716_110 Hb_005488_130 Hb_005488_130 Hb_000679_030--Hb_005488_130 Hb_056196_010 Hb_056196_010 Hb_000679_030--Hb_056196_010 Hb_164945_020 Hb_164945_020 Hb_000679_030--Hb_164945_020 Hb_000069_690 Hb_000069_690 Hb_000679_030--Hb_000069_690 Hb_002397_050 Hb_002397_050 Hb_000679_030--Hb_002397_050 Hb_000946_060--Hb_002716_110 Hb_032568_010 Hb_032568_010 Hb_000946_060--Hb_032568_010 Hb_005305_010 Hb_005305_010 Hb_000946_060--Hb_005305_010 Hb_074109_010 Hb_074109_010 Hb_000946_060--Hb_074109_010 Hb_004357_060 Hb_004357_060 Hb_000946_060--Hb_004357_060 Hb_010583_030 Hb_010583_030 Hb_000946_060--Hb_010583_030 Hb_010607_010 Hb_010607_010 Hb_003683_070--Hb_010607_010 Hb_000879_240 Hb_000879_240 Hb_003683_070--Hb_000879_240 Hb_003654_020 Hb_003654_020 Hb_003683_070--Hb_003654_020 Hb_001771_060 Hb_001771_060 Hb_003683_070--Hb_001771_060 Hb_000815_090 Hb_000815_090 Hb_003683_070--Hb_000815_090 Hb_000186_180 Hb_000186_180 Hb_003683_070--Hb_000186_180 Hb_005542_070 Hb_005542_070 Hb_001205_040--Hb_005542_070 Hb_012691_020 Hb_012691_020 Hb_001205_040--Hb_012691_020 Hb_002781_040 Hb_002781_040 Hb_001205_040--Hb_002781_040 Hb_000718_060 Hb_000718_060 Hb_001205_040--Hb_000718_060 Hb_001544_090 Hb_001544_090 Hb_001205_040--Hb_001544_090 Hb_012368_050 Hb_012368_050 Hb_001205_040--Hb_012368_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0301097 0.081112 0.103223 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0648912 0 0 0.128109

CAGE analysis