Hb_030627_010

Information

Type -
Description -
Location Contig30627: 8656-10798
Sequence    

Annotation

kegg
ID pmum:103322541
description uncharacterized protein At1g24485-like
nr
ID XP_011090084.1
description PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 [Sesamum indicum]
swissprot
ID -
description -
trembl
ID A0A022PXE9
description Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a025255mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_030627_010 0.0 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 [Sesamum indicum]
2 Hb_000062_210 0.1284295531 - - PREDICTED: BAHD acyltransferase At5g47980-like [Pyrus x bretschneideri]
3 Hb_000128_030 0.190139834 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000796_130 0.2109566604 - - PREDICTED: patatin-like protein 2 [Jatropha curcas]
5 Hb_002183_080 0.2194163365 - - catalytic, putative [Ricinus communis]
6 Hb_003540_100 0.2349689738 - - ATP-binding cassette transporter, putative [Ricinus communis]
7 Hb_007558_130 0.238086785 - - -
8 Hb_000525_070 0.2496355067 - - PREDICTED: WAT1-related protein At5g40240-like [Jatropha curcas]
9 Hb_002681_210 0.2565309315 - - PREDICTED: uncharacterized protein LOC105633686 [Jatropha curcas]
10 Hb_000184_010 0.2566994926 - - mutt domain protein, putative [Ricinus communis]
11 Hb_011282_040 0.264999412 - - Sec14 cytosolic factor, putative [Ricinus communis]
12 Hb_069338_010 0.271902125 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000926_030 0.274448259 - - zinc finger protein, putative [Ricinus communis]
14 Hb_001439_020 0.2804110348 - - PREDICTED: uncharacterized protein LOC105644112 [Jatropha curcas]
15 Hb_002968_050 0.2844077245 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
16 Hb_053272_010 0.2855967084 - - PREDICTED: vacuolar amino acid transporter 1-like [Jatropha curcas]
17 Hb_004088_050 0.289521922 - - hypothetical protein VITISV_027174 [Vitis vinifera]
18 Hb_007765_050 0.2895483603 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g11320 isoform X1 [Jatropha curcas]
19 Hb_004024_020 0.2903264442 - - ankyrin repeat-containing protein, putative [Ricinus communis]
20 Hb_002592_020 0.291097822 - - PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_030627_010 Hb_030627_010 Hb_000062_210 Hb_000062_210 Hb_030627_010--Hb_000062_210 Hb_000128_030 Hb_000128_030 Hb_030627_010--Hb_000128_030 Hb_000796_130 Hb_000796_130 Hb_030627_010--Hb_000796_130 Hb_002183_080 Hb_002183_080 Hb_030627_010--Hb_002183_080 Hb_003540_100 Hb_003540_100 Hb_030627_010--Hb_003540_100 Hb_007558_130 Hb_007558_130 Hb_030627_010--Hb_007558_130 Hb_000062_210--Hb_000128_030 Hb_000062_210--Hb_000796_130 Hb_000525_070 Hb_000525_070 Hb_000062_210--Hb_000525_070 Hb_003026_040 Hb_003026_040 Hb_000062_210--Hb_003026_040 Hb_000763_040 Hb_000763_040 Hb_000062_210--Hb_000763_040 Hb_000926_030 Hb_000926_030 Hb_000128_030--Hb_000926_030 Hb_000732_110 Hb_000732_110 Hb_000128_030--Hb_000732_110 Hb_004096_230 Hb_004096_230 Hb_000128_030--Hb_004096_230 Hb_000184_010 Hb_000184_010 Hb_000128_030--Hb_000184_010 Hb_007765_050 Hb_007765_050 Hb_000796_130--Hb_007765_050 Hb_000796_130--Hb_000525_070 Hb_002085_040 Hb_002085_040 Hb_000796_130--Hb_002085_040 Hb_000796_130--Hb_000763_040 Hb_069338_010 Hb_069338_010 Hb_002183_080--Hb_069338_010 Hb_000679_030 Hb_000679_030 Hb_002183_080--Hb_000679_030 Hb_000946_060 Hb_000946_060 Hb_002183_080--Hb_000946_060 Hb_003683_070 Hb_003683_070 Hb_002183_080--Hb_003683_070 Hb_001205_040 Hb_001205_040 Hb_002183_080--Hb_001205_040 Hb_001439_020 Hb_001439_020 Hb_003540_100--Hb_001439_020 Hb_006922_070 Hb_006922_070 Hb_003540_100--Hb_006922_070 Hb_009316_050 Hb_009316_050 Hb_003540_100--Hb_009316_050 Hb_004374_160 Hb_004374_160 Hb_003540_100--Hb_004374_160 Hb_002170_080 Hb_002170_080 Hb_003540_100--Hb_002170_080 Hb_011794_100 Hb_011794_100 Hb_003540_100--Hb_011794_100 Hb_000834_070 Hb_000834_070 Hb_007558_130--Hb_000834_070 Hb_004024_020 Hb_004024_020 Hb_007558_130--Hb_004024_020 Hb_004102_010 Hb_004102_010 Hb_007558_130--Hb_004102_010 Hb_007558_130--Hb_000062_210 Hb_012490_020 Hb_012490_020 Hb_007558_130--Hb_012490_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0401015 0.0283947 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.031017 0 0 0.0642758

CAGE analysis