Hb_004096_230

Information

Type -
Description -
Location Contig4096: 226487-230444
Sequence    

Annotation

kegg
ID tcc:TCM_019503
description Uncharacterized protein isoform 1
nr
ID XP_012077937.1
description PREDICTED: uncharacterized protein LOC105638704 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K9Y6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12963 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004096_230 0.0 - - PREDICTED: uncharacterized protein LOC105638704 isoform X1 [Jatropha curcas]
2 Hb_007120_120 0.1414549309 - - protein binding protein, putative [Ricinus communis]
3 Hb_001652_100 0.1462310951 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]
4 Hb_006711_030 0.1470929059 - - PREDICTED: rho guanine nucleotide exchange factor 8-like [Jatropha curcas]
5 Hb_009663_020 0.147178981 - - -
6 Hb_167188_020 0.1481232263 - - PREDICTED: uncharacterized protein At1g05835 [Jatropha curcas]
7 Hb_007044_240 0.1494845993 - - PREDICTED: uncharacterized protein LOC105638704 isoform X1 [Jatropha curcas]
8 Hb_012675_040 0.1495297702 - - PREDICTED: uncharacterized protein LOC105647773 isoform X1 [Jatropha curcas]
9 Hb_024071_030 0.1496124336 - - hypothetical protein CICLE_v10025479mg [Citrus clementina]
10 Hb_005276_140 0.1498119727 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001140_050 0.1499054179 - - PREDICTED: leucine-rich repeat receptor protein kinase EMS1 [Jatropha curcas]
12 Hb_008195_060 0.1500992627 transcription factor TF Family: NAC NAC transcription factor 018 [Jatropha curcas]
13 Hb_000089_170 0.1515966607 - - PREDICTED: uncharacterized protein LOC105134595 [Populus euphratica]
14 Hb_016734_100 0.1517772703 - - -
15 Hb_132840_190 0.151957811 - - PREDICTED: protein IQ-DOMAIN 1-like isoform X1 [Jatropha curcas]
16 Hb_005181_140 0.1521164827 - - hypothetical protein JCGZ_19000 [Jatropha curcas]
17 Hb_000556_060 0.1542579079 - - hypothetical protein OsJ_28181 [Oryza sativa Japonica Group]
18 Hb_008021_060 0.1548032685 - - Squalene monooxygenase, putative [Ricinus communis]
19 Hb_002411_090 0.1552782901 - - PREDICTED: putative RING-H2 finger protein ATL69 [Jatropha curcas]
20 Hb_000058_180 0.1572075785 - - PREDICTED: protein ECERIFERUM 3 [Jatropha curcas]

Gene co-expression network

sample Hb_004096_230 Hb_004096_230 Hb_007120_120 Hb_007120_120 Hb_004096_230--Hb_007120_120 Hb_001652_100 Hb_001652_100 Hb_004096_230--Hb_001652_100 Hb_006711_030 Hb_006711_030 Hb_004096_230--Hb_006711_030 Hb_009663_020 Hb_009663_020 Hb_004096_230--Hb_009663_020 Hb_167188_020 Hb_167188_020 Hb_004096_230--Hb_167188_020 Hb_007044_240 Hb_007044_240 Hb_004096_230--Hb_007044_240 Hb_007120_120--Hb_009663_020 Hb_024071_030 Hb_024071_030 Hb_007120_120--Hb_024071_030 Hb_016734_100 Hb_016734_100 Hb_007120_120--Hb_016734_100 Hb_007120_120--Hb_001652_100 Hb_163566_010 Hb_163566_010 Hb_007120_120--Hb_163566_010 Hb_001642_020 Hb_001642_020 Hb_007120_120--Hb_001642_020 Hb_008021_060 Hb_008021_060 Hb_001652_100--Hb_008021_060 Hb_007922_030 Hb_007922_030 Hb_001652_100--Hb_007922_030 Hb_000058_180 Hb_000058_180 Hb_001652_100--Hb_000058_180 Hb_001652_100--Hb_009663_020 Hb_001652_100--Hb_016734_100 Hb_002307_140 Hb_002307_140 Hb_006711_030--Hb_002307_140 Hb_006711_030--Hb_167188_020 Hb_007218_050 Hb_007218_050 Hb_006711_030--Hb_007218_050 Hb_000089_170 Hb_000089_170 Hb_006711_030--Hb_000089_170 Hb_006711_030--Hb_007044_240 Hb_000840_080 Hb_000840_080 Hb_006711_030--Hb_000840_080 Hb_009663_020--Hb_024071_030 Hb_009663_020--Hb_163566_010 Hb_009663_020--Hb_016734_100 Hb_000321_110 Hb_000321_110 Hb_009663_020--Hb_000321_110 Hb_012675_040 Hb_012675_040 Hb_167188_020--Hb_012675_040 Hb_167188_020--Hb_000089_170 Hb_002259_120 Hb_002259_120 Hb_167188_020--Hb_002259_120 Hb_002893_220 Hb_002893_220 Hb_167188_020--Hb_002893_220 Hb_167188_020--Hb_002307_140 Hb_007044_240--Hb_002307_140 Hb_000556_060 Hb_000556_060 Hb_007044_240--Hb_000556_060 Hb_007044_240--Hb_007218_050 Hb_009847_010 Hb_009847_010 Hb_007044_240--Hb_009847_010 Hb_180535_010 Hb_180535_010 Hb_007044_240--Hb_180535_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 2.16863 1.34598 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0541854 0.127843 0 0 1.21565

CAGE analysis