Hb_006922_070

Information

Type -
Description -
Location Contig6922: 110237-110999
Sequence    

Annotation

kegg
ID rcu:RCOM_0324140
description glutathione-s-transferase theta, gst, putative (EC:2.5.1.18)
nr
ID XP_002530205.1
description glutathione-s-transferase theta, gst, putative [Ricinus communis]
swissprot
ID O80852
description Glutathione S-transferase F9 OS=Arabidopsis thaliana GN=GSTF9 PE=1 SV=1
trembl
ID B9SW36
description Glutathione-s-transferase theta, gst, putative OS=Ricinus communis GN=RCOM_0324140 PE=3 SV=1
Gene Ontology
ID GO:0016740
description glutathione s-transferase f9-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006922_070 0.0 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
2 Hb_001439_020 0.1434208285 - - PREDICTED: uncharacterized protein LOC105644112 [Jatropha curcas]
3 Hb_009316_050 0.1513953212 - - PREDICTED: probable E3 ubiquitin-protein ligase RHA2B [Jatropha curcas]
4 Hb_003540_100 0.1647609932 - - ATP-binding cassette transporter, putative [Ricinus communis]
5 Hb_024570_030 0.2119058907 - - cytochrome P450, putative [Ricinus communis]
6 Hb_005154_080 0.2134248342 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105640764 [Jatropha curcas]
7 Hb_002170_080 0.2202592119 - - phosphate transporter [Manihot esculenta]
8 Hb_068804_030 0.2336321783 - - PREDICTED: uncharacterized protein LOC105639932 [Jatropha curcas]
9 Hb_027654_010 0.2398466153 - - Isoamyl acetate-hydrolyzing esterase, putative [Ricinus communis]
10 Hb_000023_050 0.2423050264 - - PREDICTED: telomere repeat-binding factor 4-like [Jatropha curcas]
11 Hb_154430_010 0.2473804261 - - PREDICTED: uncharacterized protein LOC105637632 isoform X2 [Jatropha curcas]
12 Hb_004374_160 0.2530253863 transcription factor TF Family: bHLH hypothetical protein JCGZ_20587 [Jatropha curcas]
13 Hb_039435_010 0.2540326596 - - hypothetical protein SORBIDRAFT_10g025530 [Sorghum bicolor]
14 Hb_006775_110 0.258677048 - - PREDICTED: uncharacterized protein LOC105649734 [Jatropha curcas]
15 Hb_004392_030 0.2599102069 - - oxidoreductase family protein [Populus trichocarpa]
16 Hb_002217_290 0.2630965967 - - hypothetical protein JCGZ_19038 [Jatropha curcas]
17 Hb_000922_210 0.2633906968 - - PREDICTED: 50S ribosomal protein L12, chloroplastic [Jatropha curcas]
18 Hb_000039_200 0.2636818868 - - hypothetical protein JCGZ_21346 [Jatropha curcas]
19 Hb_004357_060 0.2637672974 - - PREDICTED: uncharacterized protein At4g22758 [Jatropha curcas]
20 Hb_006789_020 0.2638995461 - - PREDICTED: LOW QUALITY PROTEIN: wall-associated receptor kinase-like 22 [Camelina sativa]

Gene co-expression network

sample Hb_006922_070 Hb_006922_070 Hb_001439_020 Hb_001439_020 Hb_006922_070--Hb_001439_020 Hb_009316_050 Hb_009316_050 Hb_006922_070--Hb_009316_050 Hb_003540_100 Hb_003540_100 Hb_006922_070--Hb_003540_100 Hb_024570_030 Hb_024570_030 Hb_006922_070--Hb_024570_030 Hb_005154_080 Hb_005154_080 Hb_006922_070--Hb_005154_080 Hb_002170_080 Hb_002170_080 Hb_006922_070--Hb_002170_080 Hb_001439_020--Hb_003540_100 Hb_001439_020--Hb_009316_050 Hb_011794_100 Hb_011794_100 Hb_001439_020--Hb_011794_100 Hb_004374_160 Hb_004374_160 Hb_001439_020--Hb_004374_160 Hb_001439_020--Hb_002170_080 Hb_009316_050--Hb_002170_080 Hb_027654_010 Hb_027654_010 Hb_009316_050--Hb_027654_010 Hb_010381_080 Hb_010381_080 Hb_009316_050--Hb_010381_080 Hb_000907_130 Hb_000907_130 Hb_009316_050--Hb_000907_130 Hb_002835_050 Hb_002835_050 Hb_009316_050--Hb_002835_050 Hb_003540_100--Hb_009316_050 Hb_003540_100--Hb_004374_160 Hb_003540_100--Hb_002170_080 Hb_003540_100--Hb_011794_100 Hb_039435_010 Hb_039435_010 Hb_024570_030--Hb_039435_010 Hb_006053_020 Hb_006053_020 Hb_024570_030--Hb_006053_020 Hb_002701_060 Hb_002701_060 Hb_024570_030--Hb_002701_060 Hb_000072_110 Hb_000072_110 Hb_024570_030--Hb_000072_110 Hb_002701_170 Hb_002701_170 Hb_024570_030--Hb_002701_170 Hb_000164_110 Hb_000164_110 Hb_024570_030--Hb_000164_110 Hb_005154_080--Hb_002170_080 Hb_022137_050 Hb_022137_050 Hb_005154_080--Hb_022137_050 Hb_004357_060 Hb_004357_060 Hb_005154_080--Hb_004357_060 Hb_000977_100 Hb_000977_100 Hb_005154_080--Hb_000977_100 Hb_004837_100 Hb_004837_100 Hb_005154_080--Hb_004837_100 Hb_000019_080 Hb_000019_080 Hb_005154_080--Hb_000019_080 Hb_002170_080--Hb_022137_050 Hb_022693_010 Hb_022693_010 Hb_002170_080--Hb_022693_010 Hb_000041_250 Hb_000041_250 Hb_002170_080--Hb_000041_250 Hb_000235_040 Hb_000235_040 Hb_002170_080--Hb_000235_040 Hb_009393_140 Hb_009393_140 Hb_002170_080--Hb_009393_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.177099 0.0591618 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0992499 0 0.123369 0.374081

CAGE analysis