Hb_027654_010

Information

Type -
Description -
Location Contig27654: 12435-16024
Sequence    

Annotation

kegg
ID rcu:RCOM_0643770
description Isoamyl acetate-hydrolyzing esterase, putative
nr
ID XP_002528096.1
description Isoamyl acetate-hydrolyzing esterase, putative [Ricinus communis]
swissprot
ID Q9SRM5
description GDSL esterase/lipase CPRD49 OS=Arabidopsis thaliana GN=CPRD49 PE=2 SV=1
trembl
ID B9SQ27
description Isoamyl acetate-hydrolyzing esterase, putative OS=Ricinus communis GN=RCOM_0643770 PE=4 SV=1
Gene Ontology
ID GO:0048046
description gdsl esterase lipase cprd49-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_027654_010 0.0 - - Isoamyl acetate-hydrolyzing esterase, putative [Ricinus communis]
2 Hb_015817_010 0.1129278487 - - PREDICTED: putative receptor protein kinase ZmPK1 [Jatropha curcas]
3 Hb_043935_010 0.1150195321 - - Receptor protein kinase-like protein [Medicago truncatula]
4 Hb_010381_080 0.1237860984 - - cytochrome P450, putative [Ricinus communis]
5 Hb_006147_020 0.1267530782 - - conserved hypothetical protein [Ricinus communis]
6 Hb_004392_030 0.1268595891 - - oxidoreductase family protein [Populus trichocarpa]
7 Hb_001699_020 0.1376705151 - - hypothetical protein L484_026849 [Morus notabilis]
8 Hb_000907_130 0.1419124336 - - -
9 Hb_004242_200 0.1423158488 transcription factor TF Family: C2H2 hypothetical protein POPTR_0001s44130g [Populus trichocarpa]
10 Hb_012539_080 0.1435773581 - - Polyprotein, putative [Solanum demissum]
11 Hb_002835_050 0.1447862979 - - PREDICTED: high-affinity nitrate transporter 3.1-like [Jatropha curcas]
12 Hb_170878_020 0.1482733341 - - -
13 Hb_080791_010 0.1486757267 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
14 Hb_002876_100 0.1598931044 - - hypothetical protein POPTR_0019s11600g [Populus trichocarpa]
15 Hb_006970_010 0.1613680774 - - lipoxygenase, putative [Ricinus communis]
16 Hb_005029_030 0.1619197629 - - PREDICTED: LOW QUALITY PROTEIN: 36.4 kDa proline-rich protein-like [Sesamum indicum]
17 Hb_004459_050 0.1619782498 - - conserved hypothetical protein [Ricinus communis]
18 Hb_009316_050 0.1641313167 - - PREDICTED: probable E3 ubiquitin-protein ligase RHA2B [Jatropha curcas]
19 Hb_000026_060 0.1683585772 - - beta-1,3-glucanase [Manihot esculenta]
20 Hb_114893_010 0.171542101 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_027654_010 Hb_027654_010 Hb_015817_010 Hb_015817_010 Hb_027654_010--Hb_015817_010 Hb_043935_010 Hb_043935_010 Hb_027654_010--Hb_043935_010 Hb_010381_080 Hb_010381_080 Hb_027654_010--Hb_010381_080 Hb_006147_020 Hb_006147_020 Hb_027654_010--Hb_006147_020 Hb_004392_030 Hb_004392_030 Hb_027654_010--Hb_004392_030 Hb_001699_020 Hb_001699_020 Hb_027654_010--Hb_001699_020 Hb_015817_010--Hb_043935_010 Hb_080791_010 Hb_080791_010 Hb_015817_010--Hb_080791_010 Hb_015817_010--Hb_006147_020 Hb_005029_030 Hb_005029_030 Hb_015817_010--Hb_005029_030 Hb_000026_060 Hb_000026_060 Hb_015817_010--Hb_000026_060 Hb_004459_050 Hb_004459_050 Hb_015817_010--Hb_004459_050 Hb_043935_010--Hb_004392_030 Hb_043935_010--Hb_006147_020 Hb_012539_080 Hb_012539_080 Hb_043935_010--Hb_012539_080 Hb_043935_010--Hb_010381_080 Hb_002659_050 Hb_002659_050 Hb_043935_010--Hb_002659_050 Hb_004242_200 Hb_004242_200 Hb_010381_080--Hb_004242_200 Hb_114893_010 Hb_114893_010 Hb_010381_080--Hb_114893_010 Hb_010381_080--Hb_006147_020 Hb_001300_240 Hb_001300_240 Hb_010381_080--Hb_001300_240 Hb_010381_080--Hb_004459_050 Hb_006147_020--Hb_004392_030 Hb_006147_020--Hb_012539_080 Hb_006147_020--Hb_080791_010 Hb_004392_030--Hb_012539_080 Hb_002835_050 Hb_002835_050 Hb_004392_030--Hb_002835_050 Hb_004392_030--Hb_010381_080 Hb_004392_030--Hb_015817_010 Hb_002876_100 Hb_002876_100 Hb_001699_020--Hb_002876_100 Hb_003462_170 Hb_003462_170 Hb_001699_020--Hb_003462_170 Hb_007632_140 Hb_007632_140 Hb_001699_020--Hb_007632_140 Hb_019135_010 Hb_019135_010 Hb_001699_020--Hb_019135_010 Hb_001699_020--Hb_015817_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.737853 0.278183 0 0.0317165
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0487806 0 0.512277 2.8571

CAGE analysis