Hb_114893_010

Information

Type -
Description -
Location Contig114893: 4482-5657
Sequence    

Annotation

kegg
ID rcu:RCOM_0703940
description Flavonol 4'-sulfotransferase, putative (EC:2.8.2.4)
nr
ID XP_002524372.1
description Flavonol 4'-sulfotransferase, putative [Ricinus communis]
swissprot
ID P52837
description Flavonol 4'-sulfotransferase OS=Flaveria chlorifolia PE=1 SV=1
trembl
ID B9SEF3
description Sulfotransferase OS=Ricinus communis GN=RCOM_0703940 PE=3 SV=1
Gene Ontology
ID GO:0008146
description flavonol 3-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_114893_010 0.0 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
2 Hb_001300_240 0.0693105979 - - shikimate dehydrogenase, putative [Ricinus communis]
3 Hb_002122_070 0.0720981663 - - unnamed protein product [Vitis vinifera]
4 Hb_039435_020 0.0723712691 - - Lysosomal Pro-X carboxypeptidase, putative [Ricinus communis]
5 Hb_004242_200 0.0739628795 transcription factor TF Family: C2H2 hypothetical protein POPTR_0001s44130g [Populus trichocarpa]
6 Hb_010381_080 0.0779285434 - - cytochrome P450, putative [Ricinus communis]
7 Hb_000199_090 0.0915672735 - - Tetrapyrrole-binding family protein [Populus trichocarpa]
8 Hb_004896_030 0.0962655015 - - hypothetical protein VITISV_007475 [Vitis vinifera]
9 Hb_113379_010 0.101603802 - - PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 1 [Jatropha curcas]
10 Hb_012539_080 0.1087957426 - - Polyprotein, putative [Solanum demissum]
11 Hb_002740_060 0.1098742257 - - PREDICTED: pectin acetylesterase 12 [Jatropha curcas]
12 Hb_006053_020 0.1099231337 - - CAP [Theobroma cacao]
13 Hb_001384_040 0.1112591804 - - PREDICTED: beta-glucosidase 17-like [Jatropha curcas]
14 Hb_000627_110 0.1118823381 - - cellulose synthase, putative [Ricinus communis]
15 Hb_000675_010 0.1124965329 - - PREDICTED: cytokinin dehydrogenase 7 [Jatropha curcas]
16 Hb_014510_030 0.1130225798 - - hypothetical protein VITISV_027576 [Vitis vinifera]
17 Hb_000907_130 0.1139294153 - - -
18 Hb_002835_050 0.1143393099 - - PREDICTED: high-affinity nitrate transporter 3.1-like [Jatropha curcas]
19 Hb_043935_010 0.1165160501 - - Receptor protein kinase-like protein [Medicago truncatula]
20 Hb_002943_020 0.1172242345 - - hypothetical protein POPTR_0075s00240g, partial [Populus trichocarpa]

Gene co-expression network

sample Hb_114893_010 Hb_114893_010 Hb_001300_240 Hb_001300_240 Hb_114893_010--Hb_001300_240 Hb_002122_070 Hb_002122_070 Hb_114893_010--Hb_002122_070 Hb_039435_020 Hb_039435_020 Hb_114893_010--Hb_039435_020 Hb_004242_200 Hb_004242_200 Hb_114893_010--Hb_004242_200 Hb_010381_080 Hb_010381_080 Hb_114893_010--Hb_010381_080 Hb_000199_090 Hb_000199_090 Hb_114893_010--Hb_000199_090 Hb_001300_240--Hb_004242_200 Hb_001300_240--Hb_010381_080 Hb_001300_240--Hb_039435_020 Hb_001300_240--Hb_002122_070 Hb_006147_020 Hb_006147_020 Hb_001300_240--Hb_006147_020 Hb_002122_070--Hb_039435_020 Hb_006053_020 Hb_006053_020 Hb_002122_070--Hb_006053_020 Hb_185474_020 Hb_185474_020 Hb_002122_070--Hb_185474_020 Hb_000675_010 Hb_000675_010 Hb_002122_070--Hb_000675_010 Hb_039435_020--Hb_006053_020 Hb_039435_020--Hb_185474_020 Hb_010311_020 Hb_010311_020 Hb_039435_020--Hb_010311_020 Hb_004242_200--Hb_010381_080 Hb_004242_200--Hb_006147_020 Hb_043935_010 Hb_043935_010 Hb_004242_200--Hb_043935_010 Hb_004146_030 Hb_004146_030 Hb_004242_200--Hb_004146_030 Hb_010381_080--Hb_043935_010 Hb_010381_080--Hb_006147_020 Hb_004459_050 Hb_004459_050 Hb_010381_080--Hb_004459_050 Hb_000627_110 Hb_000627_110 Hb_000199_090--Hb_000627_110 Hb_014510_030 Hb_014510_030 Hb_000199_090--Hb_014510_030 Hb_004896_030 Hb_004896_030 Hb_000199_090--Hb_004896_030 Hb_003073_030 Hb_003073_030 Hb_000199_090--Hb_003073_030 Hb_040245_010 Hb_040245_010 Hb_000199_090--Hb_040245_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.193665 1.89881 1.45623 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.0875 6.21802

CAGE analysis