Hb_080791_010

Information

Type -
Description -
Location Contig80791: 1-975
Sequence    

Annotation

kegg
ID rcu:RCOM_0812190
description serine-threonine protein kinase, plant-type, putative
nr
ID XP_012067737.1
description PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
swissprot
ID Q8W3M4
description Uncharacterized protein At4g06744 OS=Arabidopsis thaliana GN=At4g06744 PE=2 SV=1
trembl
ID A0A067LQA5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22116 PE=4 SV=1
Gene Ontology
ID GO:0016301
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 035_F06.ab1: 68-894

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_080791_010 0.0 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
2 Hb_000026_060 0.0449856245 - - beta-1,3-glucanase [Manihot esculenta]
3 Hb_015817_010 0.0640389956 - - PREDICTED: putative receptor protein kinase ZmPK1 [Jatropha curcas]
4 Hb_006147_020 0.0892854562 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002041_020 0.0928669899 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
6 Hb_043935_010 0.094262936 - - Receptor protein kinase-like protein [Medicago truncatula]
7 Hb_000858_050 0.0968550117 - - kinase, putative [Ricinus communis]
8 Hb_004146_030 0.097081058 - - UDP-glucosyltransferase, putative [Ricinus communis]
9 Hb_004459_050 0.0990325654 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002659_050 0.106127882 - - PREDICTED: AT-hook motif nuclear-localized protein 10 isoform X3 [Jatropha curcas]
11 Hb_003171_040 0.1062554042 - - multidrug resistance pump, putative [Ricinus communis]
12 Hb_006133_010 0.1064534276 - - PREDICTED: uncharacterized protein LOC104898613 [Beta vulgaris subsp. vulgaris]
13 Hb_005029_030 0.1069060126 - - PREDICTED: LOW QUALITY PROTEIN: 36.4 kDa proline-rich protein-like [Sesamum indicum]
14 Hb_010381_080 0.1133875213 - - cytochrome P450, putative [Ricinus communis]
15 Hb_004242_200 0.1176224408 transcription factor TF Family: C2H2 hypothetical protein POPTR_0001s44130g [Populus trichocarpa]
16 Hb_015807_020 0.121804974 - - gibberellin 20-oxidase, putative [Ricinus communis]
17 Hb_001289_050 0.1245110945 - - hypothetical protein Poptr_cp075 [Populus trichocarpa]
18 Hb_000815_110 0.1245702335 - - RecName: Full=Casparian strip membrane protein 4; Short=RcCASP4 [Ricinus communis]
19 Hb_000270_040 0.1255164493 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000007_270 0.1289195681 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_080791_010 Hb_080791_010 Hb_000026_060 Hb_000026_060 Hb_080791_010--Hb_000026_060 Hb_015817_010 Hb_015817_010 Hb_080791_010--Hb_015817_010 Hb_006147_020 Hb_006147_020 Hb_080791_010--Hb_006147_020 Hb_002041_020 Hb_002041_020 Hb_080791_010--Hb_002041_020 Hb_043935_010 Hb_043935_010 Hb_080791_010--Hb_043935_010 Hb_000858_050 Hb_000858_050 Hb_080791_010--Hb_000858_050 Hb_004146_030 Hb_004146_030 Hb_000026_060--Hb_004146_030 Hb_000026_060--Hb_000858_050 Hb_003171_040 Hb_003171_040 Hb_000026_060--Hb_003171_040 Hb_000026_060--Hb_015817_010 Hb_007426_070 Hb_007426_070 Hb_000026_060--Hb_007426_070 Hb_015817_010--Hb_043935_010 Hb_015817_010--Hb_006147_020 Hb_005029_030 Hb_005029_030 Hb_015817_010--Hb_005029_030 Hb_004459_050 Hb_004459_050 Hb_015817_010--Hb_004459_050 Hb_004392_030 Hb_004392_030 Hb_006147_020--Hb_004392_030 Hb_006147_020--Hb_043935_010 Hb_012539_080 Hb_012539_080 Hb_006147_020--Hb_012539_080 Hb_010381_080 Hb_010381_080 Hb_006147_020--Hb_010381_080 Hb_001832_180 Hb_001832_180 Hb_002041_020--Hb_001832_180 Hb_000037_090 Hb_000037_090 Hb_002041_020--Hb_000037_090 Hb_000326_110 Hb_000326_110 Hb_002041_020--Hb_000326_110 Hb_000282_100 Hb_000282_100 Hb_002041_020--Hb_000282_100 Hb_002041_020--Hb_000026_060 Hb_043935_010--Hb_004392_030 Hb_043935_010--Hb_012539_080 Hb_043935_010--Hb_010381_080 Hb_002659_050 Hb_002659_050 Hb_043935_010--Hb_002659_050 Hb_015807_020 Hb_015807_020 Hb_000858_050--Hb_015807_020 Hb_000858_050--Hb_000282_100 Hb_000858_050--Hb_004146_030 Hb_000858_050--Hb_005029_030 Hb_001289_050 Hb_001289_050 Hb_000858_050--Hb_001289_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.188345 2.17783 194.334 53.6503 0.0213975 0.0508744
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 46.4649 651.752

CAGE analysis