Hb_000326_110

Information

Type -
Description -
Location Contig326: 160813-161693
Sequence    

Annotation

kegg
ID mus:103999470
description uncharacterized protein LOC103999470
nr
ID XP_012070105.1
description PREDICTED: uncharacterized protein LOC105632350 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LG46
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10098 PE=4 SV=1
Gene Ontology
ID GO:0005524
description dipeptide transport atp-binding protein dppf

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000326_110 0.0 - - PREDICTED: uncharacterized protein LOC105632350 [Jatropha curcas]
2 Hb_011628_050 0.0515796216 - - PREDICTED: monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic isoform X1 [Jatropha curcas]
3 Hb_000134_240 0.0541005957 - - cytochrome P450, putative [Ricinus communis]
4 Hb_001038_040 0.0687335361 - - -
5 Hb_003436_040 0.0708199181 - - monovalent cation:proton antiporter, putative [Ricinus communis]
6 Hb_000692_200 0.0743343433 - - PREDICTED: thioredoxin-like protein CDSP32, chloroplastic [Jatropha curcas]
7 Hb_000037_090 0.0758204514 - - Na(+)/H(+) antiporter, putative [Ricinus communis]
8 Hb_019064_010 0.0820706496 - - -
9 Hb_004611_010 0.0861263154 - - Blue copper protein precursor, putative [Ricinus communis]
10 Hb_183420_010 0.0898112234 - - PREDICTED: uncharacterized protein LOC105781565 [Gossypium raimondii]
11 Hb_000417_010 0.0899187585 - - PREDICTED: low-temperature-induced cysteine proteinase-like [Jatropha curcas]
12 Hb_058844_010 0.0899399097 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
13 Hb_000138_030 0.0900523504 - - -
14 Hb_162002_010 0.0902182843 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
15 Hb_081874_010 0.0907336399 - - PREDICTED: uncharacterized protein LOC102581051 [Solanum tuberosum]
16 Hb_001357_320 0.0922856597 - - GRP3S, putative [Ricinus communis]
17 Hb_124016_010 0.0924553038 - - hypothetical protein POPTR_0008s21806g [Populus trichocarpa]
18 Hb_001761_090 0.093156427 - - Protein STRUBBELIG-RECEPTOR FAMILY 5 [Glycine soja]
19 Hb_002041_020 0.0931757633 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
20 Hb_008013_030 0.0932606511 - - -

Gene co-expression network

sample Hb_000326_110 Hb_000326_110 Hb_011628_050 Hb_011628_050 Hb_000326_110--Hb_011628_050 Hb_000134_240 Hb_000134_240 Hb_000326_110--Hb_000134_240 Hb_001038_040 Hb_001038_040 Hb_000326_110--Hb_001038_040 Hb_003436_040 Hb_003436_040 Hb_000326_110--Hb_003436_040 Hb_000692_200 Hb_000692_200 Hb_000326_110--Hb_000692_200 Hb_000037_090 Hb_000037_090 Hb_000326_110--Hb_000037_090 Hb_011628_050--Hb_001038_040 Hb_011628_050--Hb_000692_200 Hb_011628_050--Hb_003436_040 Hb_011628_050--Hb_000134_240 Hb_005656_220 Hb_005656_220 Hb_011628_050--Hb_005656_220 Hb_004557_020 Hb_004557_020 Hb_000134_240--Hb_004557_020 Hb_012398_020 Hb_012398_020 Hb_000134_240--Hb_012398_020 Hb_003007_020 Hb_003007_020 Hb_000134_240--Hb_003007_020 Hb_013093_010 Hb_013093_010 Hb_000134_240--Hb_013093_010 Hb_001038_040--Hb_000692_200 Hb_001038_040--Hb_003436_040 Hb_001038_040--Hb_005656_220 Hb_004611_010 Hb_004611_010 Hb_001038_040--Hb_004611_010 Hb_002161_010 Hb_002161_010 Hb_001038_040--Hb_002161_010 Hb_003436_040--Hb_000692_200 Hb_003436_040--Hb_004611_010 Hb_009663_030 Hb_009663_030 Hb_003436_040--Hb_009663_030 Hb_027403_010 Hb_027403_010 Hb_003436_040--Hb_027403_010 Hb_000692_200--Hb_009663_030 Hb_000692_200--Hb_004611_010 Hb_019064_010 Hb_019064_010 Hb_000692_200--Hb_019064_010 Hb_000037_090--Hb_019064_010 Hb_000037_090--Hb_009663_030 Hb_000037_090--Hb_003436_040 Hb_003337_080 Hb_003337_080 Hb_000037_090--Hb_003337_080 Hb_000010_380 Hb_000010_380 Hb_000037_090--Hb_000010_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.1762 0.0535597 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0353684 4.2865

CAGE analysis