Hb_000134_240

Information

Type -
Description -
Location Contig134: 220017-221863
Sequence    

Annotation

kegg
ID rcu:RCOM_1525810
description cytochrome P450, putative (EC:1.14.13.77)
nr
ID XP_002513183.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID I7C6E8
description Beta-amyrin 28-oxidase OS=Panax ginseng PE=2 SV=1
trembl
ID B9RHG4
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1525810 PE=3 SV=1
Gene Ontology
ID GO:0005506
description beta-amyrin 28-oxidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000134_240 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_000326_110 0.0541005957 - - PREDICTED: uncharacterized protein LOC105632350 [Jatropha curcas]
3 Hb_011628_050 0.0650521819 - - PREDICTED: monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic isoform X1 [Jatropha curcas]
4 Hb_004557_020 0.0773515059 - - PREDICTED: L-type lectin-domain containing receptor kinase V.9-like [Jatropha curcas]
5 Hb_012398_020 0.0773533042 - - hypothetical protein RCOM_0641040 [Ricinus communis]
6 Hb_003007_020 0.0773580125 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
7 Hb_013093_010 0.0773654091 - - retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
8 Hb_034691_020 0.0773681749 - - 14 kDa proline-rich protein DC2.15 precursor, putative [Ricinus communis]
9 Hb_029613_010 0.0773791164 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
10 Hb_003608_020 0.0773832172 - - hypothetical protein CISIN_1g041945mg [Citrus sinensis]
11 Hb_000383_040 0.0774136177 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
12 Hb_000612_060 0.0774185665 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
13 Hb_004870_030 0.0775876069 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
14 Hb_011994_050 0.0776932716 - - multicopper oxidase, putative [Ricinus communis]
15 Hb_001060_130 0.0777405693 - - -
16 Hb_000977_230 0.078147728 - - FT-like protein [Betula luminifera]
17 Hb_005271_210 0.0784489578 - - hypothetical protein JCGZ_20628 [Jatropha curcas]
18 Hb_007926_030 0.0785884149 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP13-like [Populus euphratica]
19 Hb_184798_050 0.0787220314 - - -
20 Hb_002818_140 0.0790558511 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000134_240 Hb_000134_240 Hb_000326_110 Hb_000326_110 Hb_000134_240--Hb_000326_110 Hb_011628_050 Hb_011628_050 Hb_000134_240--Hb_011628_050 Hb_004557_020 Hb_004557_020 Hb_000134_240--Hb_004557_020 Hb_012398_020 Hb_012398_020 Hb_000134_240--Hb_012398_020 Hb_003007_020 Hb_003007_020 Hb_000134_240--Hb_003007_020 Hb_013093_010 Hb_013093_010 Hb_000134_240--Hb_013093_010 Hb_000326_110--Hb_011628_050 Hb_001038_040 Hb_001038_040 Hb_000326_110--Hb_001038_040 Hb_003436_040 Hb_003436_040 Hb_000326_110--Hb_003436_040 Hb_000692_200 Hb_000692_200 Hb_000326_110--Hb_000692_200 Hb_000037_090 Hb_000037_090 Hb_000326_110--Hb_000037_090 Hb_011628_050--Hb_001038_040 Hb_011628_050--Hb_000692_200 Hb_011628_050--Hb_003436_040 Hb_005656_220 Hb_005656_220 Hb_011628_050--Hb_005656_220 Hb_004557_020--Hb_012398_020 Hb_004557_020--Hb_013093_010 Hb_004557_020--Hb_003007_020 Hb_029613_010 Hb_029613_010 Hb_004557_020--Hb_029613_010 Hb_034691_020 Hb_034691_020 Hb_004557_020--Hb_034691_020 Hb_003608_020 Hb_003608_020 Hb_004557_020--Hb_003608_020 Hb_012398_020--Hb_013093_010 Hb_012398_020--Hb_029613_010 Hb_012398_020--Hb_003007_020 Hb_012398_020--Hb_034691_020 Hb_000383_040 Hb_000383_040 Hb_012398_020--Hb_000383_040 Hb_003007_020--Hb_034691_020 Hb_003007_020--Hb_003608_020 Hb_003007_020--Hb_013093_010 Hb_003007_020--Hb_029613_010 Hb_013093_010--Hb_029613_010 Hb_013093_010--Hb_000383_040 Hb_000612_060 Hb_000612_060 Hb_013093_010--Hb_000612_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.12103 0.0306269 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0484327 5.43541

CAGE analysis