Hb_003337_080

Information

Type -
Description -
Location Contig3337: 102506-103390
Sequence    

Annotation

kegg
ID rcu:RCOM_1155240
description sigma factor sigb regulation protein rsbq, putative (EC:3.1.1.1)
nr
ID XP_012079355.1
description PREDICTED: probable esterase KAI2 [Jatropha curcas]
swissprot
ID Q9SZU7
description Probable esterase KAI2 OS=Arabidopsis thaliana GN=KAI2 PE=1 SV=1
trembl
ID A0A067KID5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12496 PE=4 SV=1
Gene Ontology
ID GO:0052689
description probable esterase kai2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003337_080 0.0 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
2 Hb_011068_010 0.0278619088 - - PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
3 Hb_000805_080 0.03711088 - - PREDICTED: abscisic acid 8'-hydroxylase 2 isoform X2 [Jatropha curcas]
4 Hb_005605_020 0.0372383204 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
5 Hb_001046_060 0.040995889 - - PREDICTED: UDP-glucose flavonoid 3-O-glucosyltransferase 7-like [Fragaria vesca subsp. vesca]
6 Hb_000640_090 0.0492774773 - - PREDICTED: calvin cycle protein CP12-2, chloroplastic-like [Jatropha curcas]
7 Hb_001287_070 0.0495614272 - - latex plastidic aldolase-like protein [Hevea brasiliensis]
8 Hb_000010_380 0.0541452791 - - hypothetical protein CICLE_v10020897mg [Citrus clementina]
9 Hb_009663_030 0.0595454632 - - Blue copper protein precursor, putative [Ricinus communis]
10 Hb_027403_010 0.0605418187 - - P66 protein [Hevea brasiliensis]
11 Hb_097940_010 0.0620772602 - - pollen protein Ole E I-like protein [Medicago truncatula]
12 Hb_000139_010 0.0622049981 - - -
13 Hb_007559_020 0.0626941514 - - peptidylprolyl isomerase, putative [Ricinus communis]
14 Hb_001104_080 0.0634298111 - - peroxiredoxin, putative [Ricinus communis]
15 Hb_107748_010 0.0637064282 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
16 Hb_000825_010 0.0652791569 - - PREDICTED: trans-cinnamate 4-monooxygenase [Jatropha curcas]
17 Hb_185830_050 0.0655847093 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 2 [Jatropha curcas]
18 Hb_001279_380 0.0658660985 - - PREDICTED: uncharacterized protein LOC105115824 isoform X1 [Populus euphratica]
19 Hb_008566_060 0.0659428429 - - conserved hypothetical protein [Ricinus communis]
20 Hb_005000_120 0.0680499902 transcription factor TF Family: C2C2-GATA hypothetical protein RCOM_1046780 [Ricinus communis]

Gene co-expression network

sample Hb_003337_080 Hb_003337_080 Hb_011068_010 Hb_011068_010 Hb_003337_080--Hb_011068_010 Hb_000805_080 Hb_000805_080 Hb_003337_080--Hb_000805_080 Hb_005605_020 Hb_005605_020 Hb_003337_080--Hb_005605_020 Hb_001046_060 Hb_001046_060 Hb_003337_080--Hb_001046_060 Hb_000640_090 Hb_000640_090 Hb_003337_080--Hb_000640_090 Hb_001287_070 Hb_001287_070 Hb_003337_080--Hb_001287_070 Hb_011068_010--Hb_001287_070 Hb_011068_010--Hb_005605_020 Hb_011068_010--Hb_001046_060 Hb_011068_010--Hb_000805_080 Hb_005000_120 Hb_005000_120 Hb_011068_010--Hb_005000_120 Hb_000010_380 Hb_000010_380 Hb_000805_080--Hb_000010_380 Hb_000805_080--Hb_001046_060 Hb_000805_080--Hb_005605_020 Hb_000805_080--Hb_001287_070 Hb_005605_020--Hb_001046_060 Hb_005605_020--Hb_000640_090 Hb_107748_010 Hb_107748_010 Hb_005605_020--Hb_107748_010 Hb_001046_060--Hb_001287_070 Hb_001046_060--Hb_107748_010 Hb_000640_090--Hb_107748_010 Hb_002893_200 Hb_002893_200 Hb_000640_090--Hb_002893_200 Hb_000640_090--Hb_001046_060 Hb_008566_060 Hb_008566_060 Hb_000640_090--Hb_008566_060 Hb_001287_070--Hb_005000_120 Hb_003090_050 Hb_003090_050 Hb_001287_070--Hb_003090_050 Hb_001287_070--Hb_000010_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0289882 1.02143 0.156486 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 2.71544

CAGE analysis