Hb_001287_070

Information

Type -
Description -
Location Contig1287: 141759-143891
Sequence    

Annotation

kegg
ID tcc:TCM_006785
description Fructose-bisphosphate aldolase 1
nr
ID AAM46780.1
description latex plastidic aldolase-like protein [Hevea brasiliensis]
swissprot
ID Q944G9
description Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=2
trembl
ID Q8LL68
description Fructose-bisphosphate aldolase OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID GO:0004332
description fructose-bisphosphate aldolase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08753: 141652-143962
cDNA
(Sanger)
(ID:Location)		 026_G09.ab1: 142701-143883 , 034_M19.ab1: 142432-143872 , 044_I18.ab1: 142479-143872

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001287_070 0.0 - - latex plastidic aldolase-like protein [Hevea brasiliensis]
2 Hb_011068_010 0.0287608167 - - PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
3 Hb_001046_060 0.0392404464 - - PREDICTED: UDP-glucose flavonoid 3-O-glucosyltransferase 7-like [Fragaria vesca subsp. vesca]
4 Hb_005000_120 0.0435359668 transcription factor TF Family: C2C2-GATA hypothetical protein RCOM_1046780 [Ricinus communis]
5 Hb_003090_050 0.0449635296 - - fructose-1,6-bisphosphatase, putative [Ricinus communis]
6 Hb_000805_080 0.0453143395 - - PREDICTED: abscisic acid 8'-hydroxylase 2 isoform X2 [Jatropha curcas]
7 Hb_000010_380 0.0462580027 - - hypothetical protein CICLE_v10020897mg [Citrus clementina]
8 Hb_003337_080 0.0495614272 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
9 Hb_000923_030 0.050849998 - - F-box family protein [Populus trichocarpa]
10 Hb_000111_460 0.0527089014 - - PREDICTED: uncharacterized protein LOC105631266 [Jatropha curcas]
11 Hb_005605_020 0.0538775975 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
12 Hb_000039_210 0.0579747589 - - PREDICTED: uncharacterized protein LOC105649449 [Jatropha curcas]
13 Hb_008748_050 0.0617958212 - - PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Populus euphratica]
14 Hb_001104_080 0.0643927854 - - peroxiredoxin, putative [Ricinus communis]
15 Hb_032631_060 0.0645942451 - - Myosin heavy chain, putative [Ricinus communis]
16 Hb_000841_040 0.0683289473 transcription factor TF Family: C2C2-CO-like transcription factor, putative [Ricinus communis]
17 Hb_000825_010 0.0689081076 - - PREDICTED: trans-cinnamate 4-monooxygenase [Jatropha curcas]
18 Hb_001832_180 0.0702117222 transcription factor TF Family: C2C2-GATA hypothetical protein RCOM_1046780 [Ricinus communis]
19 Hb_107748_010 0.0732090839 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
20 Hb_003653_030 0.0732744151 - - nucleic acid binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001287_070 Hb_001287_070 Hb_011068_010 Hb_011068_010 Hb_001287_070--Hb_011068_010 Hb_001046_060 Hb_001046_060 Hb_001287_070--Hb_001046_060 Hb_005000_120 Hb_005000_120 Hb_001287_070--Hb_005000_120 Hb_003090_050 Hb_003090_050 Hb_001287_070--Hb_003090_050 Hb_000805_080 Hb_000805_080 Hb_001287_070--Hb_000805_080 Hb_000010_380 Hb_000010_380 Hb_001287_070--Hb_000010_380 Hb_003337_080 Hb_003337_080 Hb_011068_010--Hb_003337_080 Hb_005605_020 Hb_005605_020 Hb_011068_010--Hb_005605_020 Hb_011068_010--Hb_001046_060 Hb_011068_010--Hb_000805_080 Hb_011068_010--Hb_005000_120 Hb_001046_060--Hb_005605_020 Hb_001046_060--Hb_000805_080 Hb_107748_010 Hb_107748_010 Hb_001046_060--Hb_107748_010 Hb_001046_060--Hb_003337_080 Hb_005000_120--Hb_001046_060 Hb_001621_090 Hb_001621_090 Hb_005000_120--Hb_001621_090 Hb_000039_210 Hb_000039_210 Hb_005000_120--Hb_000039_210 Hb_000111_460 Hb_000111_460 Hb_005000_120--Hb_000111_460 Hb_000841_040 Hb_000841_040 Hb_003090_050--Hb_000841_040 Hb_003090_050--Hb_000111_460 Hb_000923_030 Hb_000923_030 Hb_003090_050--Hb_000923_030 Hb_008748_050 Hb_008748_050 Hb_003090_050--Hb_008748_050 Hb_003090_050--Hb_000010_380 Hb_000805_080--Hb_000010_380 Hb_000805_080--Hb_003337_080 Hb_000805_080--Hb_005605_020 Hb_000010_380--Hb_001046_060 Hb_032631_060 Hb_032631_060 Hb_000010_380--Hb_032631_060 Hb_000010_380--Hb_011068_010 Hb_000010_380--Hb_003337_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.193473 115.414 1929.26 441.589 0.18071 0.32398
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.30671 1.67285 0.0529983 3.1294 5653.49

CAGE analysis