Hb_001046_060

Information

Type -
Description -
Location Contig1046: 96562-98576
Sequence    

Annotation

kegg
ID cmo:103487138
description UDP-glycosyltransferase 73C3-like
nr
ID XP_011468623.1
description PREDICTED: UDP-glucose flavonoid 3-O-glucosyltransferase 7-like [Fragaria vesca subsp. vesca]
swissprot
ID -
description -
trembl
ID A0A078E7D8
description BnaA08g21370D protein OS=Brassica napus GN=BnaA08g21370D PE=3 SV=1
Gene Ontology
ID GO:0016758
description scopoletin glucosyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01601: 89119-96951
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001046_060 0.0 - - PREDICTED: UDP-glucose flavonoid 3-O-glucosyltransferase 7-like [Fragaria vesca subsp. vesca]
2 Hb_005605_020 0.0359229758 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
3 Hb_000805_080 0.0365968146 - - PREDICTED: abscisic acid 8'-hydroxylase 2 isoform X2 [Jatropha curcas]
4 Hb_011068_010 0.0366366399 - - PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
5 Hb_001287_070 0.0392404464 - - latex plastidic aldolase-like protein [Hevea brasiliensis]
6 Hb_107748_010 0.0408321175 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
7 Hb_003337_080 0.040995889 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
8 Hb_000010_380 0.0410394958 - - hypothetical protein CICLE_v10020897mg [Citrus clementina]
9 Hb_005000_120 0.0423682852 transcription factor TF Family: C2C2-GATA hypothetical protein RCOM_1046780 [Ricinus communis]
10 Hb_000640_090 0.0458565752 - - PREDICTED: calvin cycle protein CP12-2, chloroplastic-like [Jatropha curcas]
11 Hb_001621_090 0.0588243279 - - hypothetical protein POPTR_0010s20810g [Populus trichocarpa]
12 Hb_001104_080 0.0598220231 - - peroxiredoxin, putative [Ricinus communis]
13 Hb_000923_030 0.060505531 - - F-box family protein [Populus trichocarpa]
14 Hb_008748_050 0.0623433845 - - PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Populus euphratica]
15 Hb_003090_050 0.064631465 - - fructose-1,6-bisphosphatase, putative [Ricinus communis]
16 Hb_000039_210 0.0649236262 - - PREDICTED: uncharacterized protein LOC105649449 [Jatropha curcas]
17 Hb_000825_010 0.0652710742 - - PREDICTED: trans-cinnamate 4-monooxygenase [Jatropha curcas]
18 Hb_032631_060 0.0710594391 - - Myosin heavy chain, putative [Ricinus communis]
19 Hb_002893_200 0.0718753245 - - aldehyde dehydrogenase, putative [Ricinus communis]
20 Hb_000111_460 0.0719358518 - - PREDICTED: uncharacterized protein LOC105631266 [Jatropha curcas]

Gene co-expression network

sample Hb_001046_060 Hb_001046_060 Hb_005605_020 Hb_005605_020 Hb_001046_060--Hb_005605_020 Hb_000805_080 Hb_000805_080 Hb_001046_060--Hb_000805_080 Hb_011068_010 Hb_011068_010 Hb_001046_060--Hb_011068_010 Hb_001287_070 Hb_001287_070 Hb_001046_060--Hb_001287_070 Hb_107748_010 Hb_107748_010 Hb_001046_060--Hb_107748_010 Hb_003337_080 Hb_003337_080 Hb_001046_060--Hb_003337_080 Hb_005605_020--Hb_011068_010 Hb_005605_020--Hb_003337_080 Hb_000640_090 Hb_000640_090 Hb_005605_020--Hb_000640_090 Hb_005605_020--Hb_107748_010 Hb_005605_020--Hb_000805_080 Hb_000010_380 Hb_000010_380 Hb_000805_080--Hb_000010_380 Hb_000805_080--Hb_003337_080 Hb_000805_080--Hb_011068_010 Hb_000805_080--Hb_001287_070 Hb_011068_010--Hb_003337_080 Hb_011068_010--Hb_001287_070 Hb_005000_120 Hb_005000_120 Hb_011068_010--Hb_005000_120 Hb_001287_070--Hb_005000_120 Hb_003090_050 Hb_003090_050 Hb_001287_070--Hb_003090_050 Hb_001287_070--Hb_000010_380 Hb_107748_010--Hb_000640_090 Hb_002893_200 Hb_002893_200 Hb_107748_010--Hb_002893_200 Hb_107748_010--Hb_000805_080 Hb_001104_080 Hb_001104_080 Hb_107748_010--Hb_001104_080 Hb_003337_080--Hb_000640_090 Hb_003337_080--Hb_001287_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.616652 17.1424 3.16347 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0548768 0.0215877 0 0.0430225 42.3689

CAGE analysis