Hb_000805_080

Information

Type -
Description -
Location Contig805: 52795-57997
Sequence    

Annotation

kegg
ID pop:POPTR_0009s03900g
description POPTRDRAFT_723222; hypothetical protein
nr
ID XP_012066993.1
description PREDICTED: abscisic acid 8'-hydroxylase 2 isoform X2 [Jatropha curcas]
swissprot
ID O81077
description Abscisic acid 8'-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP707A2 PE=2 SV=1
trembl
ID B9HPE8
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s03900g PE=3 SV=2
Gene Ontology
ID GO:0005506
description abscisic acid 8 -hydroxylase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58962: 53164-57950
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000805_080 0.0 - - PREDICTED: abscisic acid 8'-hydroxylase 2 isoform X2 [Jatropha curcas]
2 Hb_000010_380 0.0342551743 - - hypothetical protein CICLE_v10020897mg [Citrus clementina]
3 Hb_001046_060 0.0365968146 - - PREDICTED: UDP-glucose flavonoid 3-O-glucosyltransferase 7-like [Fragaria vesca subsp. vesca]
4 Hb_003337_080 0.03711088 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
5 Hb_011068_010 0.0392479634 - - PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
6 Hb_005605_020 0.0434681574 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
7 Hb_001287_070 0.0453143395 - - latex plastidic aldolase-like protein [Hevea brasiliensis]
8 Hb_001104_080 0.0497420389 - - peroxiredoxin, putative [Ricinus communis]
9 Hb_000923_030 0.0509089575 - - F-box family protein [Populus trichocarpa]
10 Hb_032631_060 0.0524251532 - - Myosin heavy chain, putative [Ricinus communis]
11 Hb_107748_010 0.0534339703 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
12 Hb_000640_090 0.0567440334 - - PREDICTED: calvin cycle protein CP12-2, chloroplastic-like [Jatropha curcas]
13 Hb_000825_010 0.0595318182 - - PREDICTED: trans-cinnamate 4-monooxygenase [Jatropha curcas]
14 Hb_005000_120 0.0642718358 transcription factor TF Family: C2C2-GATA hypothetical protein RCOM_1046780 [Ricinus communis]
15 Hb_003090_050 0.0679757508 - - fructose-1,6-bisphosphatase, putative [Ricinus communis]
16 Hb_007559_020 0.0681114664 - - peptidylprolyl isomerase, putative [Ricinus communis]
17 Hb_097940_010 0.0689367862 - - pollen protein Ole E I-like protein [Medicago truncatula]
18 Hb_000139_010 0.0707832862 - - -
19 Hb_027403_010 0.0725715598 - - P66 protein [Hevea brasiliensis]
20 Hb_001279_380 0.0741900106 - - PREDICTED: uncharacterized protein LOC105115824 isoform X1 [Populus euphratica]

Gene co-expression network

sample Hb_000805_080 Hb_000805_080 Hb_000010_380 Hb_000010_380 Hb_000805_080--Hb_000010_380 Hb_001046_060 Hb_001046_060 Hb_000805_080--Hb_001046_060 Hb_003337_080 Hb_003337_080 Hb_000805_080--Hb_003337_080 Hb_011068_010 Hb_011068_010 Hb_000805_080--Hb_011068_010 Hb_005605_020 Hb_005605_020 Hb_000805_080--Hb_005605_020 Hb_001287_070 Hb_001287_070 Hb_000805_080--Hb_001287_070 Hb_000010_380--Hb_001046_060 Hb_000010_380--Hb_001287_070 Hb_032631_060 Hb_032631_060 Hb_000010_380--Hb_032631_060 Hb_000010_380--Hb_011068_010 Hb_000010_380--Hb_003337_080 Hb_001046_060--Hb_005605_020 Hb_001046_060--Hb_011068_010 Hb_001046_060--Hb_001287_070 Hb_107748_010 Hb_107748_010 Hb_001046_060--Hb_107748_010 Hb_001046_060--Hb_003337_080 Hb_003337_080--Hb_011068_010 Hb_003337_080--Hb_005605_020 Hb_000640_090 Hb_000640_090 Hb_003337_080--Hb_000640_090 Hb_003337_080--Hb_001287_070 Hb_011068_010--Hb_001287_070 Hb_011068_010--Hb_005605_020 Hb_005000_120 Hb_005000_120 Hb_011068_010--Hb_005000_120 Hb_005605_020--Hb_000640_090 Hb_005605_020--Hb_107748_010 Hb_001287_070--Hb_005000_120 Hb_003090_050 Hb_003090_050 Hb_001287_070--Hb_003090_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.231424 8.5217 1.56321 0 0.00869516
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0533019 0 0.0141373 22.8668

CAGE analysis