Hb_011068_010

Information

Type -
Description -
Location Contig11068: 9256-10743
Sequence    

Annotation

kegg
ID rcu:RCOM_1064670
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_012072814.1
description PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
swissprot
ID Q9FVS9
description Alkane hydroxylase MAH1 OS=Arabidopsis thaliana GN=CYP96A15 PE=2 SV=1
trembl
ID B9S657
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1064670 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 86b1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011068_010 0.0 - - PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
2 Hb_003337_080 0.0278619088 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
3 Hb_001287_070 0.0287608167 - - latex plastidic aldolase-like protein [Hevea brasiliensis]
4 Hb_005605_020 0.0336817789 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
5 Hb_001046_060 0.0366366399 - - PREDICTED: UDP-glucose flavonoid 3-O-glucosyltransferase 7-like [Fragaria vesca subsp. vesca]
6 Hb_000805_080 0.0392479634 - - PREDICTED: abscisic acid 8'-hydroxylase 2 isoform X2 [Jatropha curcas]
7 Hb_005000_120 0.0499835959 transcription factor TF Family: C2C2-GATA hypothetical protein RCOM_1046780 [Ricinus communis]
8 Hb_000010_380 0.0532193979 - - hypothetical protein CICLE_v10020897mg [Citrus clementina]
9 Hb_000923_030 0.0563584565 - - F-box family protein [Populus trichocarpa]
10 Hb_003090_050 0.060991099 - - fructose-1,6-bisphosphatase, putative [Ricinus communis]
11 Hb_000640_090 0.0618023705 - - PREDICTED: calvin cycle protein CP12-2, chloroplastic-like [Jatropha curcas]
12 Hb_000825_010 0.0621735575 - - PREDICTED: trans-cinnamate 4-monooxygenase [Jatropha curcas]
13 Hb_001104_080 0.0631771807 - - peroxiredoxin, putative [Ricinus communis]
14 Hb_107748_010 0.0650837851 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
15 Hb_000039_210 0.0671174486 - - PREDICTED: uncharacterized protein LOC105649449 [Jatropha curcas]
16 Hb_008748_050 0.070365729 - - PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Populus euphratica]
17 Hb_009663_030 0.0707135963 - - Blue copper protein precursor, putative [Ricinus communis]
18 Hb_032631_060 0.070861295 - - Myosin heavy chain, putative [Ricinus communis]
19 Hb_001621_090 0.0724881088 - - hypothetical protein POPTR_0010s20810g [Populus trichocarpa]
20 Hb_000111_460 0.0732141636 - - PREDICTED: uncharacterized protein LOC105631266 [Jatropha curcas]

Gene co-expression network

sample Hb_011068_010 Hb_011068_010 Hb_003337_080 Hb_003337_080 Hb_011068_010--Hb_003337_080 Hb_001287_070 Hb_001287_070 Hb_011068_010--Hb_001287_070 Hb_005605_020 Hb_005605_020 Hb_011068_010--Hb_005605_020 Hb_001046_060 Hb_001046_060 Hb_011068_010--Hb_001046_060 Hb_000805_080 Hb_000805_080 Hb_011068_010--Hb_000805_080 Hb_005000_120 Hb_005000_120 Hb_011068_010--Hb_005000_120 Hb_003337_080--Hb_000805_080 Hb_003337_080--Hb_005605_020 Hb_003337_080--Hb_001046_060 Hb_000640_090 Hb_000640_090 Hb_003337_080--Hb_000640_090 Hb_003337_080--Hb_001287_070 Hb_001287_070--Hb_001046_060 Hb_001287_070--Hb_005000_120 Hb_003090_050 Hb_003090_050 Hb_001287_070--Hb_003090_050 Hb_001287_070--Hb_000805_080 Hb_000010_380 Hb_000010_380 Hb_001287_070--Hb_000010_380 Hb_005605_020--Hb_001046_060 Hb_005605_020--Hb_000640_090 Hb_107748_010 Hb_107748_010 Hb_005605_020--Hb_107748_010 Hb_005605_020--Hb_000805_080 Hb_001046_060--Hb_000805_080 Hb_001046_060--Hb_107748_010 Hb_000805_080--Hb_000010_380 Hb_005000_120--Hb_001046_060 Hb_001621_090 Hb_001621_090 Hb_005000_120--Hb_001621_090 Hb_000039_210 Hb_000039_210 Hb_005000_120--Hb_000039_210 Hb_000111_460 Hb_000111_460 Hb_005000_120--Hb_000111_460
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0894515 2.04103 0.411094 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 5.60078

CAGE analysis