Hb_039435_010

Information

Type -
Description -
Location Contig39435: 11363-17319
Sequence    

Annotation

kegg
ID sbi:SORBI_10g025530
description SORBIDRAFT_10g025530, Sb10g025530; hypothetical protein
nr
ID XP_002438751.1
description hypothetical protein SORBIDRAFT_10g025530 [Sorghum bicolor]
swissprot
ID Q9UHL4
description Dipeptidyl peptidase 2 OS=Homo sapiens GN=DPP7 PE=1 SV=3
trembl
ID C5Z6S6
description Putative uncharacterized protein Sb10g025530 OS=Sorghum bicolor GN=Sb10g025530 PE=4 SV=1
Gene Ontology
ID GO:0070011
description lysosomal pro-x carboxypeptidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_039435_010 0.0 - - hypothetical protein SORBIDRAFT_10g025530 [Sorghum bicolor]
2 Hb_024570_030 0.0886935687 - - cytochrome P450, putative [Ricinus communis]
3 Hb_004374_160 0.1102959806 transcription factor TF Family: bHLH hypothetical protein JCGZ_20587 [Jatropha curcas]
4 Hb_001488_350 0.1106801677 - - conserved hypothetical protein [Ricinus communis]
5 Hb_004116_050 0.1137457509 - - PREDICTED: cytochrome P450 90A1 [Jatropha curcas]
6 Hb_119443_010 0.1169855523 - - hypothetical protein JCGZ_17348 [Jatropha curcas]
7 Hb_001244_070 0.1241897339 - - hypothetical protein POPTR_0004s13470g [Populus trichocarpa]
8 Hb_000621_030 0.1245636672 - - PREDICTED: uncharacterized protein LOC105638736 isoform X1 [Jatropha curcas]
9 Hb_067558_010 0.1323614968 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
10 Hb_162174_010 0.1344919214 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
11 Hb_006053_020 0.1374138563 - - CAP [Theobroma cacao]
12 Hb_005181_190 0.1408653939 - - PREDICTED: uncharacterized protein LOC105643550 [Jatropha curcas]
13 Hb_006142_050 0.1416526419 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
14 Hb_000365_440 0.1437402294 - - Acid phosphatase 1 precursor, putative [Ricinus communis]
15 Hb_005050_030 0.1443427926 - - PREDICTED: wall-associated receptor kinase 2-like [Jatropha curcas]
16 Hb_017043_040 0.1445014268 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
17 Hb_000416_090 0.1486853943 - - Aquaporin NIP1.1, putative [Ricinus communis]
18 Hb_023732_080 0.1489759189 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
19 Hb_000181_220 0.1498036745 - - PREDICTED: MATE efflux family protein LAL5-like isoform X2 [Jatropha curcas]
20 Hb_000164_110 0.1504433376 transcription factor TF Family: C2H2 hypothetical protein POPTR_0001s44130g [Populus trichocarpa]

Gene co-expression network

sample Hb_039435_010 Hb_039435_010 Hb_024570_030 Hb_024570_030 Hb_039435_010--Hb_024570_030 Hb_004374_160 Hb_004374_160 Hb_039435_010--Hb_004374_160 Hb_001488_350 Hb_001488_350 Hb_039435_010--Hb_001488_350 Hb_004116_050 Hb_004116_050 Hb_039435_010--Hb_004116_050 Hb_119443_010 Hb_119443_010 Hb_039435_010--Hb_119443_010 Hb_001244_070 Hb_001244_070 Hb_039435_010--Hb_001244_070 Hb_006053_020 Hb_006053_020 Hb_024570_030--Hb_006053_020 Hb_002701_060 Hb_002701_060 Hb_024570_030--Hb_002701_060 Hb_000072_110 Hb_000072_110 Hb_024570_030--Hb_000072_110 Hb_002701_170 Hb_002701_170 Hb_024570_030--Hb_002701_170 Hb_000164_110 Hb_000164_110 Hb_024570_030--Hb_000164_110 Hb_004374_160--Hb_001488_350 Hb_000621_030 Hb_000621_030 Hb_004374_160--Hb_000621_030 Hb_004881_070 Hb_004881_070 Hb_004374_160--Hb_004881_070 Hb_002817_050 Hb_002817_050 Hb_004374_160--Hb_002817_050 Hb_005493_010 Hb_005493_010 Hb_004374_160--Hb_005493_010 Hb_000181_220 Hb_000181_220 Hb_001488_350--Hb_000181_220 Hb_000416_090 Hb_000416_090 Hb_001488_350--Hb_000416_090 Hb_001488_350--Hb_000621_030 Hb_001278_090 Hb_001278_090 Hb_001488_350--Hb_001278_090 Hb_001405_040 Hb_001405_040 Hb_004116_050--Hb_001405_040 Hb_067558_010 Hb_067558_010 Hb_004116_050--Hb_067558_010 Hb_004116_050--Hb_000416_090 Hb_004116_050--Hb_001244_070 Hb_004855_080 Hb_004855_080 Hb_004116_050--Hb_004855_080 Hb_005181_190 Hb_005181_190 Hb_004116_050--Hb_005181_190 Hb_176680_010 Hb_176680_010 Hb_119443_010--Hb_176680_010 Hb_017043_040 Hb_017043_040 Hb_119443_010--Hb_017043_040 Hb_119443_010--Hb_006053_020 Hb_005155_030 Hb_005155_030 Hb_119443_010--Hb_005155_030 Hb_113379_010 Hb_113379_010 Hb_119443_010--Hb_113379_010 Hb_000152_120 Hb_000152_120 Hb_001244_070--Hb_000152_120 Hb_000880_040 Hb_000880_040 Hb_001244_070--Hb_000880_040 Hb_000365_440 Hb_000365_440 Hb_001244_070--Hb_000365_440 Hb_001244_070--Hb_001405_040 Hb_020805_070 Hb_020805_070 Hb_001244_070--Hb_020805_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.03652 1.10444 0.775542 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.065288 0 0.664656 1.41704

CAGE analysis