Hb_176680_010

Information

Type -
Description -
Location Contig176680: 609-869
Sequence    

Annotation

kegg
ID rcu:RCOM_0067780
description hypothetical protein
nr
ID KDP43235.1
description hypothetical protein JCGZ_22787 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LFI0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22787 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16945: 407-930
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_176680_010 0.0 - - hypothetical protein JCGZ_22787 [Jatropha curcas]
2 Hb_001409_080 0.0799190043 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X1 [Populus euphratica]
3 Hb_006938_060 0.0934063083 - - nutrient reservoir, putative [Ricinus communis]
4 Hb_119443_010 0.0949417054 - - hypothetical protein JCGZ_17348 [Jatropha curcas]
5 Hb_067558_010 0.1148284527 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
6 Hb_012539_080 0.1184323053 - - Polyprotein, putative [Solanum demissum]
7 Hb_040718_010 0.1191890492 - - PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
8 Hb_127263_010 0.1285155489 - - hypothetical protein JCGZ_02828 [Jatropha curcas]
9 Hb_113379_010 0.1285717817 - - PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 1 [Jatropha curcas]
10 Hb_006053_020 0.1294094378 - - CAP [Theobroma cacao]
11 Hb_002151_150 0.1313494691 - - PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
12 Hb_004837_250 0.1315843724 - - conserved hypothetical protein [Ricinus communis]
13 Hb_005050_030 0.1349521154 - - PREDICTED: wall-associated receptor kinase 2-like [Jatropha curcas]
14 Hb_017043_040 0.1355727722 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
15 Hb_001384_040 0.136566939 - - PREDICTED: beta-glucosidase 17-like [Jatropha curcas]
16 Hb_005181_190 0.1367623832 - - PREDICTED: uncharacterized protein LOC105643550 [Jatropha curcas]
17 Hb_002701_170 0.1377320332 - - PREDICTED: cytochrome P450 85A [Jatropha curcas]
18 Hb_004392_030 0.138187625 - - oxidoreductase family protein [Populus trichocarpa]
19 Hb_010743_010 0.1385009915 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
20 Hb_000866_060 0.1390367967 - - putative glycerol-3-phosphate acyltransferase [Vernicia fordii]

Gene co-expression network

sample Hb_176680_010 Hb_176680_010 Hb_001409_080 Hb_001409_080 Hb_176680_010--Hb_001409_080 Hb_006938_060 Hb_006938_060 Hb_176680_010--Hb_006938_060 Hb_119443_010 Hb_119443_010 Hb_176680_010--Hb_119443_010 Hb_067558_010 Hb_067558_010 Hb_176680_010--Hb_067558_010 Hb_012539_080 Hb_012539_080 Hb_176680_010--Hb_012539_080 Hb_040718_010 Hb_040718_010 Hb_176680_010--Hb_040718_010 Hb_127263_010 Hb_127263_010 Hb_001409_080--Hb_127263_010 Hb_000866_060 Hb_000866_060 Hb_001409_080--Hb_000866_060 Hb_000239_050 Hb_000239_050 Hb_001409_080--Hb_000239_050 Hb_001409_080--Hb_006938_060 Hb_002762_050 Hb_002762_050 Hb_001409_080--Hb_002762_050 Hb_006938_060--Hb_040718_010 Hb_174168_010 Hb_174168_010 Hb_006938_060--Hb_174168_010 Hb_006938_060--Hb_000866_060 Hb_006267_040 Hb_006267_040 Hb_006938_060--Hb_006267_040 Hb_017043_040 Hb_017043_040 Hb_119443_010--Hb_017043_040 Hb_039435_010 Hb_039435_010 Hb_119443_010--Hb_039435_010 Hb_006053_020 Hb_006053_020 Hb_119443_010--Hb_006053_020 Hb_005155_030 Hb_005155_030 Hb_119443_010--Hb_005155_030 Hb_113379_010 Hb_113379_010 Hb_119443_010--Hb_113379_010 Hb_000041_210 Hb_000041_210 Hb_067558_010--Hb_000041_210 Hb_005181_190 Hb_005181_190 Hb_067558_010--Hb_005181_190 Hb_004116_050 Hb_004116_050 Hb_067558_010--Hb_004116_050 Hb_067558_010--Hb_000239_050 Hb_000947_010 Hb_000947_010 Hb_067558_010--Hb_000947_010 Hb_067558_010--Hb_001409_080 Hb_004392_030 Hb_004392_030 Hb_012539_080--Hb_004392_030 Hb_043935_010 Hb_043935_010 Hb_012539_080--Hb_043935_010 Hb_006147_020 Hb_006147_020 Hb_012539_080--Hb_006147_020 Hb_002835_050 Hb_002835_050 Hb_012539_080--Hb_002835_050 Hb_000907_130 Hb_000907_130 Hb_012539_080--Hb_000907_130 Hb_012539_080--Hb_113379_010 Hb_005050_030 Hb_005050_030 Hb_040718_010--Hb_005050_030 Hb_001369_460 Hb_001369_460 Hb_040718_010--Hb_001369_460 Hb_002151_150 Hb_002151_150 Hb_040718_010--Hb_002151_150 Hb_040718_010--Hb_174168_010 Hb_040718_010--Hb_000947_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 11.1847 5.12329 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.65798 14.6717

CAGE analysis