Hb_000041_210

Information

Type -
Description -
Location Contig41: 294287-304975
Sequence    

Annotation

kegg
ID rcu:RCOM_1095690
description kinase, putative (EC:2.7.11.30)
nr
ID XP_012081199.1
description PREDICTED: cysteine-rich receptor-like protein kinase 42 [Jatropha curcas]
swissprot
ID Q9FNE1
description Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1
trembl
ID A0A067LA36
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09565 PE=4 SV=1
Gene Ontology
ID GO:0004674
description cysteine-rich receptor-like protein kinase 42

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_40497: 294664-295671 , PASA_asmbl_40498: 295992-296733
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000041_210 0.0 - - PREDICTED: cysteine-rich receptor-like protein kinase 42 [Jatropha curcas]
2 Hb_012389_010 0.0554123259 - - hypothetical protein POPTR_0018s11820g [Populus trichocarpa]
3 Hb_067558_010 0.0648077804 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
4 Hb_000675_010 0.0673263093 - - PREDICTED: cytokinin dehydrogenase 7 [Jatropha curcas]
5 Hb_131876_010 0.0711728196 transcription factor TF Family: MYB PREDICTED: myb-related protein 308-like isoform X1 [Jatropha curcas]
6 Hb_000239_050 0.0745680603 - - PREDICTED: cyclin-D5-1-like [Jatropha curcas]
7 Hb_000483_430 0.0798775756 - - -
8 Hb_002073_150 0.0802018868 transcription factor TF Family: MYB-related PREDICTED: transcription factor MYB1R1 [Jatropha curcas]
9 Hb_005181_190 0.090561214 - - PREDICTED: uncharacterized protein LOC105643550 [Jatropha curcas]
10 Hb_127263_010 0.0923980543 - - hypothetical protein JCGZ_02828 [Jatropha curcas]
11 Hb_069696_020 0.0973646314 - - PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X2 [Jatropha curcas]
12 Hb_001409_080 0.1010063267 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X1 [Populus euphratica]
13 Hb_011104_020 0.1027538677 - - PREDICTED: ABC transporter B family member 2-like [Jatropha curcas]
14 Hb_004994_030 0.1056505701 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Jatropha curcas]
15 Hb_000984_160 0.1063910153 - - PREDICTED: amino acid permease 6-like isoform X1 [Jatropha curcas]
16 Hb_004946_010 0.1103527386 - - hypothetical protein POPTR_0013s035502g, partial [Populus trichocarpa]
17 Hb_011214_130 0.1131945191 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 86 [Jatropha curcas]
18 Hb_002762_050 0.1166186631 - - PREDICTED: uncharacterized protein LOC105640359 [Jatropha curcas]
19 Hb_000866_060 0.1166334859 - - putative glycerol-3-phosphate acyltransferase [Vernicia fordii]
20 Hb_001248_070 0.118722151 - - PREDICTED: probable polyamine transporter At3g19553 [Jatropha curcas]

Gene co-expression network

sample Hb_000041_210 Hb_000041_210 Hb_012389_010 Hb_012389_010 Hb_000041_210--Hb_012389_010 Hb_067558_010 Hb_067558_010 Hb_000041_210--Hb_067558_010 Hb_000675_010 Hb_000675_010 Hb_000041_210--Hb_000675_010 Hb_131876_010 Hb_131876_010 Hb_000041_210--Hb_131876_010 Hb_000239_050 Hb_000239_050 Hb_000041_210--Hb_000239_050 Hb_000483_430 Hb_000483_430 Hb_000041_210--Hb_000483_430 Hb_002073_150 Hb_002073_150 Hb_012389_010--Hb_002073_150 Hb_004994_030 Hb_004994_030 Hb_012389_010--Hb_004994_030 Hb_011104_020 Hb_011104_020 Hb_012389_010--Hb_011104_020 Hb_012389_010--Hb_131876_010 Hb_012389_010--Hb_000675_010 Hb_005181_190 Hb_005181_190 Hb_067558_010--Hb_005181_190 Hb_004116_050 Hb_004116_050 Hb_067558_010--Hb_004116_050 Hb_067558_010--Hb_000239_050 Hb_000947_010 Hb_000947_010 Hb_067558_010--Hb_000947_010 Hb_001409_080 Hb_001409_080 Hb_067558_010--Hb_001409_080 Hb_002943_020 Hb_002943_020 Hb_000675_010--Hb_002943_020 Hb_000675_010--Hb_002073_150 Hb_000675_010--Hb_000483_430 Hb_000675_010--Hb_131876_010 Hb_131876_010--Hb_002073_150 Hb_069696_020 Hb_069696_020 Hb_131876_010--Hb_069696_020 Hb_000984_160 Hb_000984_160 Hb_131876_010--Hb_000984_160 Hb_000627_050 Hb_000627_050 Hb_131876_010--Hb_000627_050 Hb_127263_010 Hb_127263_010 Hb_000239_050--Hb_127263_010 Hb_000866_060 Hb_000866_060 Hb_000239_050--Hb_000866_060 Hb_000300_110 Hb_000300_110 Hb_000239_050--Hb_000300_110 Hb_007545_070 Hb_007545_070 Hb_000239_050--Hb_007545_070 Hb_000424_130 Hb_000424_130 Hb_000239_050--Hb_000424_130 Hb_000483_430--Hb_011104_020 Hb_000483_430--Hb_002073_150 Hb_000483_430--Hb_012389_010 Hb_000483_430--Hb_004994_030 Hb_000023_130 Hb_000023_130 Hb_000483_430--Hb_000023_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.105942 0.967313 0.529778 0.00478196 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.238276 1.40474

CAGE analysis