Hb_000424_130

Information

Type -
Description -
Location Contig424: 156149-158392
Sequence    

Annotation

kegg
ID pop:POPTR_0006s23600g
description POPTRDRAFT_653796; hydrolase family protein
nr
ID XP_012077179.1
description PREDICTED: monoacylglycerol lipase abhd6-B-like [Jatropha curcas]
swissprot
ID P9WNH5
description 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=hsaD PE=1 SV=1
trembl
ID A0A067KCR5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07587 PE=4 SV=1
Gene Ontology
ID GO:0016787
description monoacylglycerol lipase abhd6-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41919: 156144-158458 , PASA_asmbl_41920: 156159-158277
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000424_130 0.0 - - PREDICTED: monoacylglycerol lipase abhd6-B-like [Jatropha curcas]
2 Hb_000152_350 0.0689849643 - - PREDICTED: enolase [Jatropha curcas]
3 Hb_002835_310 0.0753717416 - - ATP binding protein, putative [Ricinus communis]
4 Hb_007545_070 0.0781895293 transcription factor TF Family: MYB PREDICTED: myb-related protein 306 [Populus euphratica]
5 Hb_000300_110 0.0788330889 - - hypothetical protein JCGZ_02651 [Jatropha curcas]
6 Hb_029920_010 0.0793206307 - - pepsin A, putative [Ricinus communis]
7 Hb_127263_010 0.0797359621 - - hypothetical protein JCGZ_02828 [Jatropha curcas]
8 Hb_000239_050 0.0805426705 - - PREDICTED: cyclin-D5-1-like [Jatropha curcas]
9 Hb_002391_030 0.0886467999 - - hypothetical protein CISIN_1g020187mg [Citrus sinensis]
10 Hb_005018_010 0.0889646694 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
11 Hb_001491_070 0.0909213271 - - PREDICTED: probable beta-1,3-galactosyltransferase 17 isoform X1 [Jatropha curcas]
12 Hb_000000_390 0.0966389129 - - PREDICTED: uncharacterized protein LOC105633753 [Jatropha curcas]
13 Hb_000020_090 0.0993551841 - - hypothetical protein JCGZ_09084 [Jatropha curcas]
14 Hb_002702_010 0.0999852002 - - carbohydrate binding protein, putative [Ricinus communis]
15 Hb_000156_110 0.1006958504 - - Uncharacterized protein TCM_029490 [Theobroma cacao]
16 Hb_005535_070 0.1012598971 - - conserved hypothetical protein [Ricinus communis]
17 Hb_060253_010 0.1023452728 - - hypothetical protein JCGZ_14707 [Jatropha curcas]
18 Hb_000392_260 0.1028285922 - - PREDICTED: microtubule-associated protein RP/EB family member 1B [Jatropha curcas]
19 Hb_137222_010 0.1031503855 - - PREDICTED: hippocampus abundant transcript-like protein 1 [Jatropha curcas]
20 Hb_005337_100 0.1034599634 - - PREDICTED: uncharacterized protein LOC105629349 [Jatropha curcas]

Gene co-expression network

sample Hb_000424_130 Hb_000424_130 Hb_000152_350 Hb_000152_350 Hb_000424_130--Hb_000152_350 Hb_002835_310 Hb_002835_310 Hb_000424_130--Hb_002835_310 Hb_007545_070 Hb_007545_070 Hb_000424_130--Hb_007545_070 Hb_000300_110 Hb_000300_110 Hb_000424_130--Hb_000300_110 Hb_029920_010 Hb_029920_010 Hb_000424_130--Hb_029920_010 Hb_127263_010 Hb_127263_010 Hb_000424_130--Hb_127263_010 Hb_034235_010 Hb_034235_010 Hb_000152_350--Hb_034235_010 Hb_002078_330 Hb_002078_330 Hb_000152_350--Hb_002078_330 Hb_000152_350--Hb_029920_010 Hb_149644_030 Hb_149644_030 Hb_000152_350--Hb_149644_030 Hb_000152_350--Hb_000300_110 Hb_000156_110 Hb_000156_110 Hb_002835_310--Hb_000156_110 Hb_002391_030 Hb_002391_030 Hb_002835_310--Hb_002391_030 Hb_001516_010 Hb_001516_010 Hb_002835_310--Hb_001516_010 Hb_002835_310--Hb_007545_070 Hb_003938_230 Hb_003938_230 Hb_002835_310--Hb_003938_230 Hb_006618_110 Hb_006618_110 Hb_007545_070--Hb_006618_110 Hb_007545_070--Hb_000300_110 Hb_005892_050 Hb_005892_050 Hb_007545_070--Hb_005892_050 Hb_000239_050 Hb_000239_050 Hb_007545_070--Hb_000239_050 Hb_000300_110--Hb_127263_010 Hb_000300_110--Hb_000239_050 Hb_000300_110--Hb_029920_010 Hb_000866_060 Hb_000866_060 Hb_000300_110--Hb_000866_060 Hb_003702_060 Hb_003702_060 Hb_029920_010--Hb_003702_060 Hb_029920_010--Hb_127263_010 Hb_137222_010 Hb_137222_010 Hb_029920_010--Hb_137222_010 Hb_127263_010--Hb_000239_050 Hb_001409_080 Hb_001409_080 Hb_127263_010--Hb_001409_080 Hb_127263_010--Hb_000866_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.181136 1.86265 27.7215 17.6153 0 0.0233181
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0707757 2.66794 28.7957

CAGE analysis