Hb_001516_010

Information

Type -
Description -
Location Contig1516: 337-4245
Sequence    

Annotation

kegg
ID rcu:RCOM_0751830
description guanylate kinase, putative (EC:2.7.4.8)
nr
ID XP_012086121.1
description PREDICTED: guanylate kinase 2 [Jatropha curcas]
swissprot
ID Q9M682
description Guanylate kinase 2 OS=Arabidopsis thaliana GN=GK-2 PE=2 SV=1
trembl
ID A0A067K189
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21058 PE=4 SV=1
Gene Ontology
ID GO:0004385
description guanylate kinase 1 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12861: 401-4020
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001516_010 0.0 - - PREDICTED: guanylate kinase 2 [Jatropha curcas]
2 Hb_001079_060 0.0616108669 - - PREDICTED: probable vacuolar amino acid transporter YPQ1 isoform X1 [Jatropha curcas]
3 Hb_051663_010 0.0636178533 - - receptor-kinase, putative [Ricinus communis]
4 Hb_111985_100 0.075666265 - - beta-galactosidase, putative [Ricinus communis]
5 Hb_002835_310 0.0757524419 - - ATP binding protein, putative [Ricinus communis]
6 Hb_003938_230 0.0816953658 - - Potassium transporter, putative [Ricinus communis]
7 Hb_001514_030 0.0832563375 - - PREDICTED: cyclin-D3-3-like [Jatropha curcas]
8 Hb_032920_020 0.0874042742 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
9 Hb_000000_390 0.0878842021 - - PREDICTED: uncharacterized protein LOC105633753 [Jatropha curcas]
10 Hb_005018_010 0.0881991801 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
11 Hb_002391_030 0.0888354416 - - hypothetical protein CISIN_1g020187mg [Citrus sinensis]
12 Hb_000156_110 0.0907362025 - - Uncharacterized protein TCM_029490 [Theobroma cacao]
13 Hb_000922_200 0.0910260922 transcription factor TF Family: C2C2-Dof hypothetical protein POPTR_0012s08280g [Populus trichocarpa]
14 Hb_002609_120 0.0931848015 - - hypothetical protein POPTR_0001s25660g [Populus trichocarpa]
15 Hb_004076_060 0.0937163085 - - PREDICTED: UDP-glycosyltransferase 82A1 [Jatropha curcas]
16 Hb_005731_010 0.0980218172 - - hypothetical protein VITISV_030941 [Vitis vinifera]
17 Hb_001541_130 0.0998186869 - - GDSL esterase/lipase [Morus notabilis]
18 Hb_001674_010 0.1016395711 - - PREDICTED: reticulon-like protein B21 isoform X1 [Populus euphratica]
19 Hb_168918_010 0.102276598 - - pectin acetylesterase, putative [Ricinus communis]
20 Hb_004037_040 0.1026440617 - - PREDICTED: putative glucose-6-phosphate 1-epimerase [Jatropha curcas]

Gene co-expression network

sample Hb_001516_010 Hb_001516_010 Hb_001079_060 Hb_001079_060 Hb_001516_010--Hb_001079_060 Hb_051663_010 Hb_051663_010 Hb_001516_010--Hb_051663_010 Hb_111985_100 Hb_111985_100 Hb_001516_010--Hb_111985_100 Hb_002835_310 Hb_002835_310 Hb_001516_010--Hb_002835_310 Hb_003938_230 Hb_003938_230 Hb_001516_010--Hb_003938_230 Hb_001514_030 Hb_001514_030 Hb_001516_010--Hb_001514_030 Hb_002609_120 Hb_002609_120 Hb_001079_060--Hb_002609_120 Hb_001079_060--Hb_001514_030 Hb_004037_040 Hb_004037_040 Hb_001079_060--Hb_004037_040 Hb_009486_050 Hb_009486_050 Hb_001079_060--Hb_009486_050 Hb_001079_060--Hb_002835_310 Hb_000000_390 Hb_000000_390 Hb_051663_010--Hb_000000_390 Hb_051663_010--Hb_111985_100 Hb_000922_200 Hb_000922_200 Hb_051663_010--Hb_000922_200 Hb_032920_020 Hb_032920_020 Hb_051663_010--Hb_032920_020 Hb_051663_010--Hb_009486_050 Hb_001541_130 Hb_001541_130 Hb_111985_100--Hb_001541_130 Hb_111985_100--Hb_032920_020 Hb_001095_020 Hb_001095_020 Hb_111985_100--Hb_001095_020 Hb_002150_090 Hb_002150_090 Hb_111985_100--Hb_002150_090 Hb_000156_110 Hb_000156_110 Hb_002835_310--Hb_000156_110 Hb_002391_030 Hb_002391_030 Hb_002835_310--Hb_002391_030 Hb_000424_130 Hb_000424_130 Hb_002835_310--Hb_000424_130 Hb_007545_070 Hb_007545_070 Hb_002835_310--Hb_007545_070 Hb_002835_310--Hb_003938_230 Hb_008304_010 Hb_008304_010 Hb_003938_230--Hb_008304_010 Hb_002822_010 Hb_002822_010 Hb_003938_230--Hb_002822_010 Hb_001488_420 Hb_001488_420 Hb_003938_230--Hb_001488_420 Hb_000008_150 Hb_000008_150 Hb_003938_230--Hb_000008_150 Hb_168918_010 Hb_168918_010 Hb_001514_030--Hb_168918_010 Hb_001514_030--Hb_004037_040 Hb_004122_010 Hb_004122_010 Hb_001514_030--Hb_004122_010 Hb_007218_040 Hb_007218_040 Hb_001514_030--Hb_007218_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.363048 10.3724 252.439 231.544 0.425995 0.274371
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.427376 0.265478 0.335648 34.0084 205.662

CAGE analysis