Hb_024570_030

Information

Type -
Description -
Location Contig24570: 40084-42737
Sequence    

Annotation

kegg
ID rcu:RCOM_0798550
description cytochrome P450, putative (EC:1.3.3.9)
nr
ID XP_002516485.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q93Z79
description Cytochrome P450 714A1 OS=Arabidopsis thaliana GN=CYP714A1 PE=2 SV=1
trembl
ID B9RRW6
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0798550 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 714a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_25594: 41423-42691
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_024570_030 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_039435_010 0.0886935687 - - hypothetical protein SORBIDRAFT_10g025530 [Sorghum bicolor]
3 Hb_006053_020 0.1152090012 - - CAP [Theobroma cacao]
4 Hb_002701_060 0.1207222217 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000072_110 0.1265502877 - - PREDICTED: U-box domain-containing protein 35 [Jatropha curcas]
6 Hb_002701_170 0.1269174214 - - PREDICTED: cytochrome P450 85A [Jatropha curcas]
7 Hb_000164_110 0.1276292256 transcription factor TF Family: C2H2 hypothetical protein POPTR_0001s44130g [Populus trichocarpa]
8 Hb_006970_120 0.1374985996 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000574_010 0.1375648504 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_06096 [Jatropha curcas]
10 Hb_068804_030 0.1417353243 - - PREDICTED: uncharacterized protein LOC105639932 [Jatropha curcas]
11 Hb_000560_060 0.1434237751 - - PREDICTED: endochitinase PR4-like [Jatropha curcas]
12 Hb_067558_010 0.1451235262 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
13 Hb_119443_010 0.1485347416 - - hypothetical protein JCGZ_17348 [Jatropha curcas]
14 Hb_002122_070 0.1495914598 - - unnamed protein product [Vitis vinifera]
15 Hb_039435_020 0.1509635061 - - Lysosomal Pro-X carboxypeptidase, putative [Ricinus communis]
16 Hb_004374_160 0.1549027903 transcription factor TF Family: bHLH hypothetical protein JCGZ_20587 [Jatropha curcas]
17 Hb_004116_050 0.1559523694 - - PREDICTED: cytochrome P450 90A1 [Jatropha curcas]
18 Hb_005181_190 0.1579380927 - - PREDICTED: uncharacterized protein LOC105643550 [Jatropha curcas]
19 Hb_001488_350 0.1586546626 - - conserved hypothetical protein [Ricinus communis]
20 Hb_176680_010 0.1591725288 - - hypothetical protein JCGZ_22787 [Jatropha curcas]

Gene co-expression network

sample Hb_024570_030 Hb_024570_030 Hb_039435_010 Hb_039435_010 Hb_024570_030--Hb_039435_010 Hb_006053_020 Hb_006053_020 Hb_024570_030--Hb_006053_020 Hb_002701_060 Hb_002701_060 Hb_024570_030--Hb_002701_060 Hb_000072_110 Hb_000072_110 Hb_024570_030--Hb_000072_110 Hb_002701_170 Hb_002701_170 Hb_024570_030--Hb_002701_170 Hb_000164_110 Hb_000164_110 Hb_024570_030--Hb_000164_110 Hb_004374_160 Hb_004374_160 Hb_039435_010--Hb_004374_160 Hb_001488_350 Hb_001488_350 Hb_039435_010--Hb_001488_350 Hb_004116_050 Hb_004116_050 Hb_039435_010--Hb_004116_050 Hb_119443_010 Hb_119443_010 Hb_039435_010--Hb_119443_010 Hb_001244_070 Hb_001244_070 Hb_039435_010--Hb_001244_070 Hb_039435_020 Hb_039435_020 Hb_006053_020--Hb_039435_020 Hb_006053_020--Hb_002701_060 Hb_002122_070 Hb_002122_070 Hb_006053_020--Hb_002122_070 Hb_006970_120 Hb_006970_120 Hb_006053_020--Hb_006970_120 Hb_067558_010 Hb_067558_010 Hb_006053_020--Hb_067558_010 Hb_006053_020--Hb_000072_110 Hb_002701_060--Hb_002701_170 Hb_002701_060--Hb_000072_110 Hb_000574_010 Hb_000574_010 Hb_002701_060--Hb_000574_010 Hb_002701_060--Hb_006970_120 Hb_002701_060--Hb_039435_020 Hb_000072_110--Hb_002701_170 Hb_004324_320 Hb_004324_320 Hb_000072_110--Hb_004324_320 Hb_170023_010 Hb_170023_010 Hb_000072_110--Hb_170023_010 Hb_000072_110--Hb_006970_120 Hb_000560_060 Hb_000560_060 Hb_002701_170--Hb_000560_060 Hb_006789_020 Hb_006789_020 Hb_002701_170--Hb_006789_020 Hb_010678_010 Hb_010678_010 Hb_002701_170--Hb_010678_010 Hb_002151_150 Hb_002151_150 Hb_002701_170--Hb_002151_150 Hb_000164_110--Hb_006970_120 Hb_000380_140 Hb_000380_140 Hb_000164_110--Hb_000380_140 Hb_004946_010 Hb_004946_010 Hb_000164_110--Hb_004946_010 Hb_000164_110--Hb_002122_070 Hb_000901_010 Hb_000901_010 Hb_000164_110--Hb_000901_010 Hb_000147_020 Hb_000147_020 Hb_000164_110--Hb_000147_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0610913 1.24075 0.604828 0 0.011543
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0943656 0 0.78122 1.92761

CAGE analysis