Hb_000901_010

Information

Type -
Description -
Location Contig901: 14985-17931
Sequence    

Annotation

kegg
ID rcu:RCOM_0701180
description hypothetical protein
nr
ID XP_012071470.1
description PREDICTED: putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 [Jatropha curcas]
swissprot
ID Q39086
description Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1
trembl
ID B9SC01
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0701180 PE=4 SV=1
Gene Ontology
ID GO:0000166
description cysteine-rich receptor-like protein kinase 19

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61951: 15455-15846
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000901_010 0.0 - - PREDICTED: putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 [Jatropha curcas]
2 Hb_002078_320 0.0703200673 - - PREDICTED: glucuronoxylan 4-O-methyltransferase 1 [Jatropha curcas]
3 Hb_000987_020 0.074627035 - - PREDICTED: protein trichome birefringence-like 35 [Jatropha curcas]
4 Hb_004946_010 0.0797745026 - - hypothetical protein POPTR_0013s035502g, partial [Populus trichocarpa]
5 Hb_020805_070 0.0929857194 - - PREDICTED: MLO protein homolog 1-like [Jatropha curcas]
6 Hb_004855_080 0.0961591273 - - hypothetical protein JCGZ_25039 [Jatropha curcas]
7 Hb_000260_750 0.0985675951 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 7-like [Jatropha curcas]
8 Hb_003506_010 0.1012594326 - - hypothetical protein JCGZ_01146 [Jatropha curcas]
9 Hb_001405_040 0.1032210695 - - PREDICTED: 3-ketoacyl-CoA synthase 11-like [Jatropha curcas]
10 Hb_002601_140 0.1067076028 - - signal transducer, putative [Ricinus communis]
11 Hb_004162_320 0.1112912183 - - PREDICTED: uncharacterized protein LOC105628009 isoform X1 [Jatropha curcas]
12 Hb_000694_050 0.1118703853 - - Nuclease PA3, putative [Ricinus communis]
13 Hb_000380_140 0.1118768862 - - PREDICTED: uncharacterized protein LOC105628069 [Jatropha curcas]
14 Hb_000185_170 0.1129526612 - - ATP binding protein, putative [Ricinus communis]
15 Hb_002635_020 0.1142635199 - - hypothetical protein POPTR_0018s09790g [Populus trichocarpa]
16 Hb_078582_010 0.1155507419 - - hypothetical protein POPTR_0005s01620g [Populus trichocarpa]
17 Hb_000023_130 0.1159904591 - - Metal-nicotianamine transporter YSL1 [Glycine soja]
18 Hb_002890_200 0.1163356423 - - PREDICTED: methionine S-methyltransferase [Jatropha curcas]
19 Hb_000162_200 0.1170508274 - - PREDICTED: uncharacterized protein LOC105641759 isoform X2 [Jatropha curcas]
20 Hb_001579_060 0.1174263427 - - carbonic anhydrase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000901_010 Hb_000901_010 Hb_002078_320 Hb_002078_320 Hb_000901_010--Hb_002078_320 Hb_000987_020 Hb_000987_020 Hb_000901_010--Hb_000987_020 Hb_004946_010 Hb_004946_010 Hb_000901_010--Hb_004946_010 Hb_020805_070 Hb_020805_070 Hb_000901_010--Hb_020805_070 Hb_004855_080 Hb_004855_080 Hb_000901_010--Hb_004855_080 Hb_000260_750 Hb_000260_750 Hb_000901_010--Hb_000260_750 Hb_003506_010 Hb_003506_010 Hb_002078_320--Hb_003506_010 Hb_004162_320 Hb_004162_320 Hb_002078_320--Hb_004162_320 Hb_002078_320--Hb_000987_020 Hb_000185_170 Hb_000185_170 Hb_002078_320--Hb_000185_170 Hb_002078_320--Hb_020805_070 Hb_001579_060 Hb_001579_060 Hb_000987_020--Hb_001579_060 Hb_000987_020--Hb_000185_170 Hb_000694_050 Hb_000694_050 Hb_000987_020--Hb_000694_050 Hb_000037_200 Hb_000037_200 Hb_000987_020--Hb_000037_200 Hb_000380_140 Hb_000380_140 Hb_004946_010--Hb_000380_140 Hb_006970_120 Hb_006970_120 Hb_004946_010--Hb_006970_120 Hb_000483_430 Hb_000483_430 Hb_004946_010--Hb_000483_430 Hb_004946_010--Hb_000987_020 Hb_000023_130 Hb_000023_130 Hb_004946_010--Hb_000023_130 Hb_001405_040 Hb_001405_040 Hb_020805_070--Hb_001405_040 Hb_020805_070--Hb_004162_320 Hb_020805_070--Hb_003506_010 Hb_005892_040 Hb_005892_040 Hb_020805_070--Hb_005892_040 Hb_000008_150 Hb_000008_150 Hb_004855_080--Hb_000008_150 Hb_001488_420 Hb_001488_420 Hb_004855_080--Hb_001488_420 Hb_004855_080--Hb_001405_040 Hb_000759_040 Hb_000759_040 Hb_004855_080--Hb_000759_040 Hb_004855_080--Hb_003506_010 Hb_004602_010 Hb_004602_010 Hb_004855_080--Hb_004602_010 Hb_000880_040 Hb_000880_040 Hb_000260_750--Hb_000880_040 Hb_004324_320 Hb_004324_320 Hb_000260_750--Hb_004324_320 Hb_009102_010 Hb_009102_010 Hb_000260_750--Hb_009102_010 Hb_078582_010 Hb_078582_010 Hb_000260_750--Hb_078582_010 Hb_002601_140 Hb_002601_140 Hb_000260_750--Hb_002601_140 Hb_000260_750--Hb_002078_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.205403 0.694121 0.45324 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0152394 0 0.320943 0.775876

CAGE analysis