Hb_000759_040

Information

Type -
Description -
Location Contig759: 102007-103287
Sequence    

Annotation

kegg
ID rcu:RCOM_0546030
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.18)
nr
ID XP_012075115.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Jatropha curcas]
swissprot
ID Q9FLV4
description G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1
trembl
ID A0A067KSW1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10349 PE=3 SV=1
Gene Ontology
ID GO:0004687
description g-type lectin s-receptor-like serine threonine-protein kinase at1g34300

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000759_040 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Jatropha curcas]
2 Hb_005892_050 0.0505949641 - - PREDICTED: uncharacterized protein LOC105632175 [Jatropha curcas]
3 Hb_004602_010 0.069884574 - - PREDICTED: uncharacterized protein LOC105042236 isoform X2 [Elaeis guineensis]
4 Hb_000023_130 0.0706605466 - - Metal-nicotianamine transporter YSL1 [Glycine soja]
5 Hb_004855_080 0.073174086 - - hypothetical protein JCGZ_25039 [Jatropha curcas]
6 Hb_001488_420 0.0769021152 - - PREDICTED: ABC transporter B family member 27 [Jatropha curcas]
7 Hb_006618_110 0.0859033975 - - -
8 Hb_000008_150 0.0925374848 - - PREDICTED: putative cyclic nucleotide-gated ion channel 15 [Jatropha curcas]
9 Hb_078582_010 0.0928998255 - - hypothetical protein POPTR_0005s01620g [Populus trichocarpa]
10 Hb_003043_130 0.0941480345 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor CRF2-like [Jatropha curcas]
11 Hb_004218_140 0.0945729015 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 isoform X3 [Jatropha curcas]
12 Hb_000185_170 0.0958148159 - - ATP binding protein, putative [Ricinus communis]
13 Hb_132356_010 0.0961355333 - - receptor serine/threonine kinase, putative [Ricinus communis]
14 Hb_007545_070 0.0990173655 transcription factor TF Family: MYB PREDICTED: myb-related protein 306 [Populus euphratica]
15 Hb_009788_020 0.1017364456 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Jatropha curcas]
16 Hb_000037_200 0.1024521298 - - RNA binding protein, putative [Ricinus communis]
17 Hb_002822_010 0.1044877689 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Populus euphratica]
18 Hb_000486_020 0.1061261631 - - PREDICTED: L-type lectin-domain containing receptor kinase VIII.2 [Jatropha curcas]
19 Hb_005535_070 0.1129954082 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000239_050 0.1166106545 - - PREDICTED: cyclin-D5-1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000759_040 Hb_000759_040 Hb_005892_050 Hb_005892_050 Hb_000759_040--Hb_005892_050 Hb_004602_010 Hb_004602_010 Hb_000759_040--Hb_004602_010 Hb_000023_130 Hb_000023_130 Hb_000759_040--Hb_000023_130 Hb_004855_080 Hb_004855_080 Hb_000759_040--Hb_004855_080 Hb_001488_420 Hb_001488_420 Hb_000759_040--Hb_001488_420 Hb_006618_110 Hb_006618_110 Hb_000759_040--Hb_006618_110 Hb_005892_050--Hb_006618_110 Hb_005892_050--Hb_004602_010 Hb_007545_070 Hb_007545_070 Hb_005892_050--Hb_007545_070 Hb_004218_140 Hb_004218_140 Hb_005892_050--Hb_004218_140 Hb_003101_020 Hb_003101_020 Hb_005892_050--Hb_003101_020 Hb_004602_010--Hb_004218_140 Hb_000008_150 Hb_000008_150 Hb_004602_010--Hb_000008_150 Hb_004602_010--Hb_001488_420 Hb_008304_010 Hb_008304_010 Hb_004602_010--Hb_008304_010 Hb_001051_010 Hb_001051_010 Hb_000023_130--Hb_001051_010 Hb_132356_010 Hb_132356_010 Hb_000023_130--Hb_132356_010 Hb_009788_020 Hb_009788_020 Hb_000023_130--Hb_009788_020 Hb_000037_200 Hb_000037_200 Hb_000023_130--Hb_000037_200 Hb_001629_120 Hb_001629_120 Hb_000023_130--Hb_001629_120 Hb_004855_080--Hb_000008_150 Hb_004855_080--Hb_001488_420 Hb_001405_040 Hb_001405_040 Hb_004855_080--Hb_001405_040 Hb_003506_010 Hb_003506_010 Hb_004855_080--Hb_003506_010 Hb_004855_080--Hb_004602_010 Hb_001488_420--Hb_000008_150 Hb_001488_420--Hb_004218_140 Hb_001488_420--Hb_003506_010 Hb_006618_110--Hb_007545_070 Hb_003937_010 Hb_003937_010 Hb_006618_110--Hb_003937_010 Hb_000486_020 Hb_000486_020 Hb_006618_110--Hb_000486_020 Hb_011013_040 Hb_011013_040 Hb_006618_110--Hb_011013_040 Hb_010136_010 Hb_010136_010 Hb_006618_110--Hb_010136_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.292323 1.72568 0.813744 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.319022 1.22655

CAGE analysis