Hb_132356_010

Information

Type -
Description -
Location Contig132356: 29-748
Sequence    

Annotation

kegg
ID rcu:RCOM_1310790
description receptor serine/threonine kinase, putative
nr
ID XP_002527020.1
description receptor serine/threonine kinase, putative [Ricinus communis]
swissprot
ID Q9FID5
description Probable receptor-like protein kinase At5g39030 OS=Arabidopsis thaliana GN=At5g39030 PE=2 SV=1
trembl
ID B9SM01
description Receptor serine/threonine kinase, putative OS=Ricinus communis GN=RCOM_1310790 PE=3 SV=1
Gene Ontology
ID GO:0004674
description receptor serine threonine

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_132356_010 0.0 - - receptor serine/threonine kinase, putative [Ricinus communis]
2 Hb_000023_130 0.083560527 - - Metal-nicotianamine transporter YSL1 [Glycine soja]
3 Hb_006618_110 0.0887298842 - - -
4 Hb_000759_040 0.0961355333 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Jatropha curcas]
5 Hb_001301_260 0.1000151759 - - PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like isoform X1 [Jatropha curcas]
6 Hb_010534_040 0.1000826664 - - PREDICTED: uncharacterized protein LOC105644385 isoform X1 [Jatropha curcas]
7 Hb_000302_360 0.1002054056 - - beta-carotene hydroxylase, putative [Ricinus communis]
8 Hb_063405_010 0.1015290449 - - PREDICTED: probable terpene synthase 3 [Jatropha curcas]
9 Hb_001606_010 0.1021725685 - - kinase, putative [Ricinus communis]
10 Hb_000486_020 0.105606405 - - PREDICTED: L-type lectin-domain containing receptor kinase VIII.2 [Jatropha curcas]
11 Hb_005892_050 0.1084557317 - - PREDICTED: uncharacterized protein LOC105632175 [Jatropha curcas]
12 Hb_001321_010 0.1088980213 - - HIGH-CHLOROPHYLL-FLUORESCENCE 101 family protein [Populus trichocarpa]
13 Hb_002890_160 0.1091141181 - - PREDICTED: protein root UVB sensitive 6 isoform X1 [Jatropha curcas]
14 Hb_003937_010 0.109806108 - - hypothetical protein JCGZ_20930 [Jatropha curcas]
15 Hb_003531_050 0.1098535972 - - PREDICTED: pyridoxal reductase, chloroplastic [Jatropha curcas]
16 Hb_001352_030 0.1106515068 - - PREDICTED: uncharacterized protein LOC105636310 [Jatropha curcas]
17 Hb_000265_170 0.112189883 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
18 Hb_010136_010 0.1134267406 - - Putative receptor-like protein kinase [Glycine soja]
19 Hb_000037_200 0.1136991704 - - RNA binding protein, putative [Ricinus communis]
20 Hb_004994_030 0.1162172901 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Jatropha curcas]

Gene co-expression network

sample Hb_132356_010 Hb_132356_010 Hb_000023_130 Hb_000023_130 Hb_132356_010--Hb_000023_130 Hb_006618_110 Hb_006618_110 Hb_132356_010--Hb_006618_110 Hb_000759_040 Hb_000759_040 Hb_132356_010--Hb_000759_040 Hb_001301_260 Hb_001301_260 Hb_132356_010--Hb_001301_260 Hb_010534_040 Hb_010534_040 Hb_132356_010--Hb_010534_040 Hb_000302_360 Hb_000302_360 Hb_132356_010--Hb_000302_360 Hb_000023_130--Hb_000759_040 Hb_001051_010 Hb_001051_010 Hb_000023_130--Hb_001051_010 Hb_009788_020 Hb_009788_020 Hb_000023_130--Hb_009788_020 Hb_000037_200 Hb_000037_200 Hb_000023_130--Hb_000037_200 Hb_001629_120 Hb_001629_120 Hb_000023_130--Hb_001629_120 Hb_007545_070 Hb_007545_070 Hb_006618_110--Hb_007545_070 Hb_003937_010 Hb_003937_010 Hb_006618_110--Hb_003937_010 Hb_005892_050 Hb_005892_050 Hb_006618_110--Hb_005892_050 Hb_000486_020 Hb_000486_020 Hb_006618_110--Hb_000486_020 Hb_011013_040 Hb_011013_040 Hb_006618_110--Hb_011013_040 Hb_010136_010 Hb_010136_010 Hb_006618_110--Hb_010136_010 Hb_000759_040--Hb_005892_050 Hb_004602_010 Hb_004602_010 Hb_000759_040--Hb_004602_010 Hb_004855_080 Hb_004855_080 Hb_000759_040--Hb_004855_080 Hb_001488_420 Hb_001488_420 Hb_000759_040--Hb_001488_420 Hb_000759_040--Hb_006618_110 Hb_001606_010 Hb_001606_010 Hb_001301_260--Hb_001606_010 Hb_003531_050 Hb_003531_050 Hb_001301_260--Hb_003531_050 Hb_001352_030 Hb_001352_030 Hb_001301_260--Hb_001352_030 Hb_044653_050 Hb_044653_050 Hb_001301_260--Hb_044653_050 Hb_001301_260--Hb_001629_120 Hb_010534_040--Hb_000302_360 Hb_010534_040--Hb_000486_020 Hb_010534_040--Hb_001352_030 Hb_010534_040--Hb_001606_010 Hb_000645_260 Hb_000645_260 Hb_010534_040--Hb_000645_260 Hb_002890_160 Hb_002890_160 Hb_010534_040--Hb_002890_160 Hb_001269_060 Hb_001269_060 Hb_000302_360--Hb_001269_060 Hb_000302_360--Hb_000645_260 Hb_000302_360--Hb_001606_010 Hb_014720_140 Hb_014720_140 Hb_000302_360--Hb_014720_140 Hb_015934_060 Hb_015934_060 Hb_000302_360--Hb_015934_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.04034 4.50567 1.95328 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.109496 0.571774 3.88477

CAGE analysis