Hb_010136_010

Information

Type -
Description -
Location Contig10136: 1700-2065
Sequence    

Annotation

kegg
ID cam:101493839
description uncharacterized LOC101493839
nr
ID KHN05173.1
description Putative receptor-like protein kinase [Glycine soja]
swissprot
ID -
description -
trembl
ID A0A0B2PBW0
description Putative receptor-like protein kinase OS=Glycine soja GN=glysoja_028071 PE=4 SV=1
Gene Ontology
ID GO:0000166
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010136_010 0.0 - - Putative receptor-like protein kinase [Glycine soja]
2 Hb_003435_030 0.059297748 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
3 Hb_000155_020 0.0605157174 - - PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic isoform X1 [Jatropha curcas]
4 Hb_011013_040 0.0719364705 transcription factor TF Family: C2C2-YABBY unknown [Populus trichocarpa]
5 Hb_001115_070 0.0747471551 - - RecName: Full=CASP-like protein 2C1; Short=PtCASPL2C1 [Populus trichocarpa]
6 Hb_004017_030 0.0769858386 - - PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Jatropha curcas]
7 Hb_012395_090 0.0797320717 - - PREDICTED: protein PROTON GRADIENT REGULATION 5, chloroplastic [Jatropha curcas]
8 Hb_002284_160 0.079778945 - - glyceraldehyde 3-phosphate dehydrogenase, putative [Ricinus communis]
9 Hb_018591_020 0.0798079075 - - Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast precursor, putative [Ricinus communis]
10 Hb_002007_220 0.0798090312 - - PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Jatropha curcas]
11 Hb_001942_010 0.0815885181 - - hypothetical protein JCGZ_20930 [Jatropha curcas]
12 Hb_000046_120 0.0816013999 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
13 Hb_001926_070 0.0849585016 - - hypothetical protein JCGZ_21510 [Jatropha curcas]
14 Hb_006618_110 0.0855707631 - - -
15 Hb_000486_020 0.0873785027 - - PREDICTED: L-type lectin-domain containing receptor kinase VIII.2 [Jatropha curcas]
16 Hb_002702_010 0.0903251196 - - carbohydrate binding protein, putative [Ricinus communis]
17 Hb_000270_090 0.0916832486 - - nitrate transporter, putative [Ricinus communis]
18 Hb_001321_010 0.0919826841 - - HIGH-CHLOROPHYLL-FLUORESCENCE 101 family protein [Populus trichocarpa]
19 Hb_001051_010 0.0930116829 - - PREDICTED: putative cyclic nucleotide-gated ion channel 15 [Jatropha curcas]
20 Hb_000007_330 0.0943889482 - - PREDICTED: probable E3 ubiquitin-protein ligase RHA2B [Jatropha curcas]

Gene co-expression network

sample Hb_010136_010 Hb_010136_010 Hb_003435_030 Hb_003435_030 Hb_010136_010--Hb_003435_030 Hb_000155_020 Hb_000155_020 Hb_010136_010--Hb_000155_020 Hb_011013_040 Hb_011013_040 Hb_010136_010--Hb_011013_040 Hb_001115_070 Hb_001115_070 Hb_010136_010--Hb_001115_070 Hb_004017_030 Hb_004017_030 Hb_010136_010--Hb_004017_030 Hb_012395_090 Hb_012395_090 Hb_010136_010--Hb_012395_090 Hb_000046_120 Hb_000046_120 Hb_003435_030--Hb_000046_120 Hb_060253_010 Hb_060253_010 Hb_003435_030--Hb_060253_010 Hb_001942_010 Hb_001942_010 Hb_003435_030--Hb_001942_010 Hb_018591_020 Hb_018591_020 Hb_003435_030--Hb_018591_020 Hb_002702_010 Hb_002702_010 Hb_003435_030--Hb_002702_010 Hb_000155_020--Hb_011013_040 Hb_001159_050 Hb_001159_050 Hb_000155_020--Hb_001159_050 Hb_000155_020--Hb_012395_090 Hb_002007_220 Hb_002007_220 Hb_000155_020--Hb_002007_220 Hb_000155_020--Hb_004017_030 Hb_011013_040--Hb_012395_090 Hb_001266_010 Hb_001266_010 Hb_011013_040--Hb_001266_010 Hb_011013_040--Hb_002702_010 Hb_011013_040--Hb_001159_050 Hb_003038_230 Hb_003038_230 Hb_011013_040--Hb_003038_230 Hb_002284_160 Hb_002284_160 Hb_001115_070--Hb_002284_160 Hb_127629_010 Hb_127629_010 Hb_001115_070--Hb_127629_010 Hb_000002_500 Hb_000002_500 Hb_001115_070--Hb_000002_500 Hb_001115_070--Hb_004017_030 Hb_001115_070--Hb_018591_020 Hb_007462_020 Hb_007462_020 Hb_004017_030--Hb_007462_020 Hb_001369_340 Hb_001369_340 Hb_004017_030--Hb_001369_340 Hb_003767_060 Hb_003767_060 Hb_004017_030--Hb_003767_060 Hb_004017_030--Hb_002284_160 Hb_012395_090--Hb_002702_010 Hb_012395_090--Hb_001942_010 Hb_004223_150 Hb_004223_150 Hb_012395_090--Hb_004223_150 Hb_012395_090--Hb_001159_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.482526 1.8542 1.04296 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0817514 1.90723

CAGE analysis