Hb_001301_260

Information

Type -
Description -
Location Contig1301: 178633-182211
Sequence    

Annotation

kegg
ID rcu:RCOM_0584650
description 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative (EC:2.3.1.51)
nr
ID XP_012070810.1
description PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like isoform X1 [Jatropha curcas]
swissprot
ID Q42670
description 1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cocos nucifera PE=1 SV=1
trembl
ID A0A067KSK2
description 1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Jatropha curcas GN=JCGZ_00879 PE=3 SV=1
Gene Ontology
ID GO:0016746
description 1-acyl-sn-glycerol-3-phosphate acyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09036: 171531-179611 , PASA_asmbl_09037: 182084-182455
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001301_260 0.0 - - PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like isoform X1 [Jatropha curcas]
2 Hb_001606_010 0.0883242664 - - kinase, putative [Ricinus communis]
3 Hb_003531_050 0.0893071154 - - PREDICTED: pyridoxal reductase, chloroplastic [Jatropha curcas]
4 Hb_001352_030 0.0931415169 - - PREDICTED: uncharacterized protein LOC105636310 [Jatropha curcas]
5 Hb_044653_050 0.0937125689 - - PREDICTED: CTL-like protein DDB_G0274487 isoform X1 [Jatropha curcas]
6 Hb_001629_120 0.0979156705 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At4g27220 isoform X2 [Populus euphratica]
7 Hb_132356_010 0.1000151759 - - receptor serine/threonine kinase, putative [Ricinus communis]
8 Hb_005365_010 0.1001433222 - - PREDICTED: serine carboxypeptidase-like 20 [Jatropha curcas]
9 Hb_000185_170 0.1027868902 - - ATP binding protein, putative [Ricinus communis]
10 Hb_000023_130 0.1049606759 - - Metal-nicotianamine transporter YSL1 [Glycine soja]
11 Hb_001143_120 0.1059591906 - - PREDICTED: uncharacterized protein LOC105638955 [Jatropha curcas]
12 Hb_003873_020 0.1076690321 - - PREDICTED: root phototropism protein 2 [Jatropha curcas]
13 Hb_000302_360 0.1090179568 - - beta-carotene hydroxylase, putative [Ricinus communis]
14 Hb_000486_020 0.1098611661 - - PREDICTED: L-type lectin-domain containing receptor kinase VIII.2 [Jatropha curcas]
15 Hb_039075_020 0.1104815965 - - PREDICTED: uncharacterized protein LOC103331245 [Prunus mume]
16 Hb_000627_040 0.1113612612 - - leucine-rich repeat protein, putative [Ricinus communis]
17 Hb_010534_040 0.1129342789 - - PREDICTED: uncharacterized protein LOC105644385 isoform X1 [Jatropha curcas]
18 Hb_006922_020 0.1131403779 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 34 [Jatropha curcas]
19 Hb_001926_070 0.1131986559 - - hypothetical protein JCGZ_21510 [Jatropha curcas]
20 Hb_017491_010 0.114222583 - - PREDICTED: phosphoinositide phosphatase SAC2 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001301_260 Hb_001301_260 Hb_001606_010 Hb_001606_010 Hb_001301_260--Hb_001606_010 Hb_003531_050 Hb_003531_050 Hb_001301_260--Hb_003531_050 Hb_001352_030 Hb_001352_030 Hb_001301_260--Hb_001352_030 Hb_044653_050 Hb_044653_050 Hb_001301_260--Hb_044653_050 Hb_001629_120 Hb_001629_120 Hb_001301_260--Hb_001629_120 Hb_132356_010 Hb_132356_010 Hb_001301_260--Hb_132356_010 Hb_001926_070 Hb_001926_070 Hb_001606_010--Hb_001926_070 Hb_000890_170 Hb_000890_170 Hb_001606_010--Hb_000890_170 Hb_001606_010--Hb_001352_030 Hb_000486_020 Hb_000486_020 Hb_001606_010--Hb_000486_020 Hb_032731_010 Hb_032731_010 Hb_001606_010--Hb_032731_010 Hb_001606_010--Hb_003531_050 Hb_003531_050--Hb_001352_030 Hb_002890_160 Hb_002890_160 Hb_003531_050--Hb_002890_160 Hb_000265_170 Hb_000265_170 Hb_003531_050--Hb_000265_170 Hb_000302_360 Hb_000302_360 Hb_003531_050--Hb_000302_360 Hb_001352_030--Hb_000265_170 Hb_010534_040 Hb_010534_040 Hb_001352_030--Hb_010534_040 Hb_005486_020 Hb_005486_020 Hb_001352_030--Hb_005486_020 Hb_001352_030--Hb_002890_160 Hb_007130_020 Hb_007130_020 Hb_044653_050--Hb_007130_020 Hb_007894_120 Hb_007894_120 Hb_044653_050--Hb_007894_120 Hb_017491_010 Hb_017491_010 Hb_044653_050--Hb_017491_010 Hb_004228_070 Hb_004228_070 Hb_044653_050--Hb_004228_070 Hb_005365_010 Hb_005365_010 Hb_044653_050--Hb_005365_010 Hb_001629_120--Hb_005365_010 Hb_000173_270 Hb_000173_270 Hb_001629_120--Hb_000173_270 Hb_000818_090 Hb_000818_090 Hb_001629_120--Hb_000818_090 Hb_000023_130 Hb_000023_130 Hb_001629_120--Hb_000023_130 Hb_000185_170 Hb_000185_170 Hb_001629_120--Hb_000185_170 Hb_001051_010 Hb_001051_010 Hb_001629_120--Hb_001051_010 Hb_132356_010--Hb_000023_130 Hb_006618_110 Hb_006618_110 Hb_132356_010--Hb_006618_110 Hb_000759_040 Hb_000759_040 Hb_132356_010--Hb_000759_040 Hb_132356_010--Hb_010534_040 Hb_132356_010--Hb_000302_360
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.25199 3.48811 2.20483 0.0136271 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0489166 0.489821 2.55956

CAGE analysis