Hb_005486_020

Information

Type transcription factor
Description TF Family: HB
Location Contig5486: 43038-45992
Sequence    

Annotation

kegg
ID tcc:TCM_016864
description Homeobox-leucine zipper protein HAT5
nr
ID XP_012081814.1
description PREDICTED: homeobox-leucine zipper protein HAT5 [Jatropha curcas]
swissprot
ID Q02283
description Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5 PE=1 SV=1
trembl
ID A0A067LDR0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09617 PE=4 SV=1
Gene Ontology
ID GO:0003700
description homeobox-leucine zipper protein hat5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_48056: 43114-45857
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005486_020 0.0 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT5 [Jatropha curcas]
2 Hb_000990_040 0.0665451844 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 7 [Jatropha curcas]
3 Hb_029095_010 0.0792917623 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21060 [Jatropha curcas]
4 Hb_001352_030 0.0845307831 - - PREDICTED: uncharacterized protein LOC105636310 [Jatropha curcas]
5 Hb_002596_090 0.0882702185 - - PREDICTED: calcium-transporting ATPase 4, plasma membrane-type-like isoform X1 [Jatropha curcas]
6 Hb_093364_010 0.0885588096 - - PREDICTED: uncharacterized protein LOC105636199 [Jatropha curcas]
7 Hb_111997_010 0.0979689754 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Vitis vinifera]
8 Hb_000265_170 0.0997985044 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
9 Hb_000199_040 0.1004938386 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
10 Hb_003777_120 0.101054644 - - -
11 Hb_003531_050 0.101268085 - - PREDICTED: pyridoxal reductase, chloroplastic [Jatropha curcas]
12 Hb_000185_170 0.1039306557 - - ATP binding protein, putative [Ricinus communis]
13 Hb_028487_040 0.1081715325 - - hypothetical protein POPTR_0010s11910g [Populus trichocarpa]
14 Hb_004611_050 0.1094400825 - - PREDICTED: uncharacterized protein LOC105628744 [Jatropha curcas]
15 Hb_044653_050 0.1097927915 - - PREDICTED: CTL-like protein DDB_G0274487 isoform X1 [Jatropha curcas]
16 Hb_006188_020 0.1106834787 - - PREDICTED: uncharacterized protein LOC105646403 [Jatropha curcas]
17 Hb_003337_020 0.1134327061 - - PREDICTED: uncharacterized protein LOC105116455 [Populus euphratica]
18 Hb_074966_010 0.1135753217 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
19 Hb_001301_260 0.1161284567 - - PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like isoform X1 [Jatropha curcas]
20 Hb_005999_020 0.1165114816 transcription factor TF Family: C2H2 PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_005486_020 Hb_005486_020 Hb_000990_040 Hb_000990_040 Hb_005486_020--Hb_000990_040 Hb_029095_010 Hb_029095_010 Hb_005486_020--Hb_029095_010 Hb_001352_030 Hb_001352_030 Hb_005486_020--Hb_001352_030 Hb_002596_090 Hb_002596_090 Hb_005486_020--Hb_002596_090 Hb_093364_010 Hb_093364_010 Hb_005486_020--Hb_093364_010 Hb_111997_010 Hb_111997_010 Hb_005486_020--Hb_111997_010 Hb_000990_040--Hb_093364_010 Hb_004611_050 Hb_004611_050 Hb_000990_040--Hb_004611_050 Hb_000990_040--Hb_029095_010 Hb_000185_170 Hb_000185_170 Hb_000990_040--Hb_000185_170 Hb_007894_120 Hb_007894_120 Hb_000990_040--Hb_007894_120 Hb_029095_010--Hb_093364_010 Hb_029095_010--Hb_002596_090 Hb_031685_010 Hb_031685_010 Hb_029095_010--Hb_031685_010 Hb_029095_010--Hb_004611_050 Hb_003531_050 Hb_003531_050 Hb_001352_030--Hb_003531_050 Hb_000265_170 Hb_000265_170 Hb_001352_030--Hb_000265_170 Hb_001606_010 Hb_001606_010 Hb_001352_030--Hb_001606_010 Hb_010534_040 Hb_010534_040 Hb_001352_030--Hb_010534_040 Hb_002890_160 Hb_002890_160 Hb_001352_030--Hb_002890_160 Hb_003029_010 Hb_003029_010 Hb_002596_090--Hb_003029_010 Hb_028487_040 Hb_028487_040 Hb_002596_090--Hb_028487_040 Hb_000152_410 Hb_000152_410 Hb_002596_090--Hb_000152_410 Hb_029584_110 Hb_029584_110 Hb_002596_090--Hb_029584_110 Hb_093364_010--Hb_004611_050 Hb_000020_020 Hb_000020_020 Hb_093364_010--Hb_000020_020 Hb_093364_010--Hb_000185_170 Hb_074966_010 Hb_074966_010 Hb_111997_010--Hb_074966_010 Hb_006188_020 Hb_006188_020 Hb_111997_010--Hb_006188_020 Hb_001677_170 Hb_001677_170 Hb_111997_010--Hb_001677_170 Hb_111997_010--Hb_001606_010 Hb_059318_010 Hb_059318_010 Hb_111997_010--Hb_059318_010 Hb_001926_070 Hb_001926_070 Hb_111997_010--Hb_001926_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0900052 7.77207 17.0315 6.52821 0.0629921 0.0113181
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0294012 0.0462627 0.043544 2.58347 9.55356

CAGE analysis