Hb_093364_010

Information

Type -
Description -
Location Contig93364: 13186-15580
Sequence    

Annotation

kegg
ID pop:POPTR_0016s00790g
description POPTRDRAFT_776772; hypothetical protein
nr
ID XP_012074790.1
description PREDICTED: uncharacterized protein LOC105636199 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KKG1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08946 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_093364_010 0.0 - - PREDICTED: uncharacterized protein LOC105636199 [Jatropha curcas]
2 Hb_029095_010 0.0319397958 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21060 [Jatropha curcas]
3 Hb_000990_040 0.0724723214 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 7 [Jatropha curcas]
4 Hb_004611_050 0.0727807348 - - PREDICTED: uncharacterized protein LOC105628744 [Jatropha curcas]
5 Hb_000020_020 0.079244404 - - hypothetical protein JCGZ_06491 [Jatropha curcas]
6 Hb_005486_020 0.0885588096 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT5 [Jatropha curcas]
7 Hb_000185_170 0.1003560197 - - ATP binding protein, putative [Ricinus communis]
8 Hb_002030_090 0.1028997364 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
9 Hb_003849_030 0.1100992754 - - hypothetical protein AALP_AA5G029900 [Arabis alpina]
10 Hb_002596_090 0.1140899619 - - PREDICTED: calcium-transporting ATPase 4, plasma membrane-type-like isoform X1 [Jatropha curcas]
11 Hb_094439_010 0.1165840624 - - PREDICTED: MACPF domain-containing protein At1g14780 [Jatropha curcas]
12 Hb_031685_010 0.1177225594 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
13 Hb_000987_020 0.1189467456 - - PREDICTED: protein trichome birefringence-like 35 [Jatropha curcas]
14 Hb_006789_030 0.1194498429 - - PREDICTED: wall-associated receptor kinase-like 22 [Prunus mume]
15 Hb_000062_050 0.1195249587 - - protein binding protein, putative [Ricinus communis]
16 Hb_000265_170 0.1221172957 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
17 Hb_000046_430 0.1227320737 - - hypothetical protein JCGZ_02013 [Jatropha curcas]
18 Hb_003029_010 0.124032335 transcription factor TF Family: WRKY conserved hypothetical protein [Ricinus communis]
19 Hb_000037_200 0.1251389017 - - RNA binding protein, putative [Ricinus communis]
20 Hb_001918_030 0.1255279236 - - -

Gene co-expression network

sample Hb_093364_010 Hb_093364_010 Hb_029095_010 Hb_029095_010 Hb_093364_010--Hb_029095_010 Hb_000990_040 Hb_000990_040 Hb_093364_010--Hb_000990_040 Hb_004611_050 Hb_004611_050 Hb_093364_010--Hb_004611_050 Hb_000020_020 Hb_000020_020 Hb_093364_010--Hb_000020_020 Hb_005486_020 Hb_005486_020 Hb_093364_010--Hb_005486_020 Hb_000185_170 Hb_000185_170 Hb_093364_010--Hb_000185_170 Hb_029095_010--Hb_005486_020 Hb_029095_010--Hb_000990_040 Hb_002596_090 Hb_002596_090 Hb_029095_010--Hb_002596_090 Hb_031685_010 Hb_031685_010 Hb_029095_010--Hb_031685_010 Hb_029095_010--Hb_004611_050 Hb_000990_040--Hb_005486_020 Hb_000990_040--Hb_004611_050 Hb_000990_040--Hb_000185_170 Hb_007894_120 Hb_007894_120 Hb_000990_040--Hb_007894_120 Hb_004117_280 Hb_004117_280 Hb_004611_050--Hb_004117_280 Hb_004611_050--Hb_000020_020 Hb_004611_050--Hb_000185_170 Hb_001918_030 Hb_001918_030 Hb_000020_020--Hb_001918_030 Hb_000020_020--Hb_029095_010 Hb_001266_130 Hb_001266_130 Hb_000020_020--Hb_001266_130 Hb_000046_430 Hb_000046_430 Hb_000020_020--Hb_000046_430 Hb_001352_030 Hb_001352_030 Hb_005486_020--Hb_001352_030 Hb_005486_020--Hb_002596_090 Hb_111997_010 Hb_111997_010 Hb_005486_020--Hb_111997_010 Hb_070136_010 Hb_070136_010 Hb_000185_170--Hb_070136_010 Hb_000037_200 Hb_000037_200 Hb_000185_170--Hb_000037_200 Hb_002078_320 Hb_002078_320 Hb_000185_170--Hb_002078_320 Hb_000987_020 Hb_000987_020 Hb_000185_170--Hb_000987_020 Hb_001629_120 Hb_001629_120 Hb_000185_170--Hb_001629_120 Hb_000265_170 Hb_000265_170 Hb_000185_170--Hb_000265_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.130813 0.249612 0.0893751 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0677046 0.158839

CAGE analysis